Index

A

adaptive() (in module zoomy_core.fvm.timestepping) add_equation() (zoomy_core.model.models.derived_system.System method) (zoomy_core.model.models.derived_system.SystemBoundaryConditions method) ADVECTIVE_FLUX (zoomy_core.model.models.zeta_projection.TermType attribute) ADVECTIVE_FLUX_CROSS (zoomy_core.model.models.zeta_projection.TermType attribute) all_equations() (zoomy_core.model.models.model_derivation.PreProjectedEquations method) (zoomy_core.model.models.vam_derivation.VAMPreProjectedEquations method) (zoomy_core.model.models.vam_zeta_projection.VAMZetaProjectedEquations method) (zoomy_core.model.models.zeta_projection.ZetaProjectedEquations method) allreduce_min() (in module zoomy_jax.fvm.halo_exchange) AmrexCore (class in zoomy_core.transformation.to_amrex) AmrexModel (class in zoomy_core.transformation.to_amrex) AmrexNumerics (class in zoomy_core.transformation.to_amrex) analyse_phase_velocity() (zoomy_core.model.analysis_linear.LinearWaveAnalyser method) analytic_source_jvp() (in module zoomy_core.fvm.jvp_numpy) analytic_source_jvp_jax() (in module zoomy_jax.fvm.jvp_jax) analytical_weighted_integral() (zoomy_core.model.models.basisfunctions.Chebyshevu_shifted method) (zoomy_core.model.models.basisfunctions.Legendre_shifted method) ansatz_in_layer() (zoomy_core.model.models.legacy.pde_generator.LayeredAnsatz method) applied_operations (zoomy_core.model.models.derived_model.DerivedModel property) apply() (zoomy_core.model.initial_conditions.Constant method) (zoomy_core.model.initial_conditions.InitialConditions method) (zoomy_core.model.initial_conditions.RadialDambreak method) (zoomy_core.model.initial_conditions.RestartFromHdf5 method) (zoomy_core.model.initial_conditions.RP method) (zoomy_core.model.initial_conditions.RP2d method) (zoomy_core.model.initial_conditions.RP3d method) (zoomy_core.model.initial_conditions.UserFunction method) (zoomy_core.model.models.derived_model.DerivedModel method) (zoomy_core.model.models.derived_system.System method) (zoomy_core.model.models.derived_system.SystemBoundaryConditions method) (zoomy_core.model.models.ins_generator.Expression method) apply_all() (zoomy_core.model.models.legacy.pde_generator.BoundaryConditions method) apply_bcs() (zoomy_core.model.models.ins_generator.DepthIntegralResult method) (zoomy_core.model.models.ins_generator.IBPResult method) apply_physical_bcs() (zoomy_core.model.models.legacy.pde_generator.InterfaceRouter method) apply_to() (zoomy_core.model.models.ins_generator.ApplyKinematicBCs method) (zoomy_core.model.models.ins_generator.Integrate method) (zoomy_core.model.models.ins_generator.Operation method) (zoomy_core.model.models.ins_generator.ProductRule method) (zoomy_core.model.models.ins_generator.Relation method) (zoomy_core.model.models.ins_generator.SimplifyIntegrals method) (zoomy_core.model.models.ins_generator.ZetaTransform method)

apply_to_continuity() (zoomy_core.model.models.legacy.pde_generator.BoundaryConditions method) apply_to_expression() (zoomy_core.model.models.ins_generator.DepthIntegrate method) (zoomy_core.model.models.ins_generator.Operation method) apply_to_momentum() (zoomy_core.model.models.legacy.pde_generator.BoundaryConditions method) apply_to_system_bcs() (zoomy_core.model.boundary_conditions.SystemExtrapolation method) (zoomy_core.model.boundary_conditions.SystemPeriodic method) (zoomy_core.model.boundary_conditions.SystemWall method) apply_to_term() (zoomy_core.model.models.derived_system.System method) (zoomy_core.model.models.ins_generator.Expression method) ApplyKinematicBCs (class in zoomy_core.model.models.ins_generator) ARG_MAPPING (zoomy_core.transformation.generic_c.GenericCppBase attribute) args (zoomy_core.model.basefunction.Function attribute) as_dict() (zoomy_core.misc.misc.Zstruct method) assemble() (zoomy_core.model.models.ins_generator.DepthIntegralResult method) (zoomy_core.model.models.ins_generator.IBPResult method) Assumption (class in zoomy_core.model.models.ins_generator) assumptions (class in zoomy_core.model.models.ins_generator) (zoomy_core.model.models.derived_system.System attribute) assumptions_applied (zoomy_core.model.models.model_derivation.PreProjectedEquations attribute) (zoomy_core.model.models.vam_derivation.VAMPreProjectedEquations attribute) (zoomy_core.model.models.vam_zeta_projection.VAMZetaProjectedEquations attribute) (zoomy_core.model.models.zeta_projection.ZetaProjectedEquations attribute) auto_requested_derivatives (zoomy_core.model.derivative_workflow.StructuredDerivativeModel attribute) aux_boundary_conditions (zoomy_core.model.basemodel.Model attribute) aux_initial_conditions (zoomy_core.model.basemodel.Model attribute) aux_name() (zoomy_core.model.derivative_workflow.DerivativeSpec method) aux_variables (zoomy_core.model.basemodel.Model attribute) (zoomy_core.model.models.legacy.shallow_water_topo.ShallowWaterEquationsWithTopo attribute) aux_variables() (zoomy_core.model.derivative_workflow.StructuredDerivativeModel method) (zoomy_core.model.models.legacy.shallow_water.ShallowWaterEquations method) axes (zoomy_core.model.derivative_workflow.DerivativeSpec attribute)

B

BaseMesh (class in zoomy_core.mesh.base_mesh) basis_definition() (zoomy_core.model.models.basisfunctions.Basisfunction method) (zoomy_core.model.models.basisfunctions.Chebyshevu method) (zoomy_core.model.models.basisfunctions.Chebyshevu_shifted method) (zoomy_core.model.models.basisfunctions.GalerkinBasis method) (zoomy_core.model.models.basisfunctions.Legendre_DN method) (zoomy_core.model.models.basisfunctions.Legendre_shifted method) (zoomy_core.model.models.basisfunctions.OrthogonalSplineWithConstant method) (zoomy_core.model.models.basisfunctions.Spline method) (zoomy_core.model.models.basisfunctions.SplineBasis method) basis_type (zoomy_core.model.models.derived_model.DerivedModel attribute) (zoomy_core.model.models.projected_model.ProjectedModel attribute) (zoomy_core.model.models.vam_projected_model.VAMProjectedHyperbolic attribute) Basisfunction (class in zoomy_core.model.models.basisfunctions) BasisMatrixCache (class in zoomy_core.model.models.legacy.basis_cache) blending (zoomy_core.model.boundary_conditions.Wall attribute) boundary_bottom (zoomy_core.model.models.legacy.pde_generator.ProjectedEquation attribute) boundary_conditions (zoomy_core.model.basemodel.Model attribute) boundary_conditions_list (zoomy_core.model.boundary_conditions.BoundaryConditions attribute) boundary_conditions_list_dict (zoomy_core.model.boundary_conditions.BoundaryConditions property) boundary_conditions_sorted_names (zoomy_core.mesh.base_mesh.BaseMesh attribute) (zoomy_jax.mesh.mesh.MeshJAX attribute) boundary_conditions_sorted_physical_tags (zoomy_core.mesh.base_mesh.BaseMesh attribute) (zoomy_jax.mesh.mesh.MeshJAX attribute) boundary_face_cells (zoomy_core.mesh.base_mesh.BaseMesh attribute) (zoomy_jax.mesh.mesh.MeshJAX attribute)

boundary_face_face_indices (zoomy_core.mesh.base_mesh.BaseMesh attribute) (zoomy_jax.mesh.mesh.MeshJAX attribute) boundary_face_function_numbers (zoomy_core.mesh.base_mesh.BaseMesh attribute) (zoomy_jax.mesh.mesh.MeshJAX attribute) boundary_face_ghosts (zoomy_core.mesh.base_mesh.BaseMesh attribute) (zoomy_jax.mesh.mesh.MeshJAX attribute) boundary_face_physical_tags (zoomy_core.mesh.base_mesh.BaseMesh attribute) (zoomy_jax.mesh.mesh.MeshJAX attribute) boundary_lower (zoomy_core.model.models.ins_generator.DepthIntegralResult attribute) (zoomy_core.model.models.ins_generator.IBPResult attribute) boundary_top (zoomy_core.model.models.legacy.pde_generator.ProjectedEquation attribute) boundary_upper (zoomy_core.model.models.ins_generator.DepthIntegralResult attribute) (zoomy_core.model.models.ins_generator.IBPResult attribute) boundary_values() (zoomy_core.model.models.symbolic_integrator.SymbolicIntegrator method) BoundaryCondition (class in zoomy_core.model.boundary_conditions) BoundaryConditions (class in zoomy_core.model.boundary_conditions) (class in zoomy_core.model.models.legacy.pde_generator) bounds() (zoomy_core.model.models.basisfunctions.Basisfunction method) (zoomy_core.model.models.basisfunctions.Chebyshevu method) (zoomy_core.model.models.basisfunctions.Chebyshevu_shifted method) (zoomy_core.model.models.basisfunctions.GalerkinBasis method) (zoomy_core.model.models.basisfunctions.Legendre_DN method) (zoomy_core.model.models.basisfunctions.SplineBasis method) build_monomial_indices() (in module zoomy_core.mesh.lsq_reconstruction) build_vandermonde() (in module zoomy_core.mesh.lsq_reconstruction) by_category() (zoomy_core.mesh.mesh_catalog.MeshCatalog method)

C

c_functions (zoomy_core.transformation.generic_c.GenericCppBase attribute) cached() (zoomy_core.mesh.mesh_catalog.MeshCatalog method) category (zoomy_core.mesh.mesh_catalog.MeshEntry property) cell_centers (zoomy_core.mesh.fvm_mesh.FVMMesh property) (zoomy_jax.mesh.mesh.MeshJAX attribute) cell_centers_computed() (zoomy_core.mesh.base_mesh.BaseMesh method) (zoomy_core.mesh.fvm_mesh.FVMMesh method) cell_faces (zoomy_core.mesh.base_mesh.BaseMesh attribute) (zoomy_jax.mesh.mesh.MeshJAX attribute) cell_inradius (zoomy_core.mesh.fvm_mesh.FVMMesh property) (zoomy_jax.mesh.mesh.MeshJAX attribute) cell_inradius_computed() (zoomy_core.mesh.base_mesh.BaseMesh method) (zoomy_core.mesh.fvm_mesh.FVMMesh method) cell_neighbors (zoomy_core.mesh.base_mesh.BaseMesh attribute) (zoomy_jax.mesh.mesh.MeshJAX attribute) cell_vertices (zoomy_core.mesh.base_mesh.BaseMesh attribute) (zoomy_jax.mesh.mesh.MeshJAX attribute) cell_volumes (zoomy_core.mesh.fvm_mesh.FVMMesh property) (zoomy_jax.mesh.mesh.MeshJAX attribute) cell_volumes_computed() (zoomy_core.mesh.base_mesh.BaseMesh method) (zoomy_core.mesh.fvm_mesh.FVMMesh method) center() (in module zoomy_core.mesh.mesh_util) CenteredFlux (class in zoomy_jax.fvm.flux) CFL (zoomy_core.fvm.legacy.projection_solver.ProjectionSolver attribute) CharacteristicReflective (class in zoomy_core.model.boundary_conditions) Chebyshevu (class in zoomy_core.model.models.basisfunctions) Chebyshevu_shifted (class in zoomy_core.model.models.basisfunctions) chezy() (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlow method) (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlowEnergy method) (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlowPathconservative method) chezy_C (zoomy_core.model.models.legacy.shallow_water.ShallowWaterEquations attribute) chezy_friction_term() (zoomy_core.model.models.legacy.shallow_water.ShallowWaterEquations method) (zoomy_core.model.models.legacy.shallow_water_topo.ShallowWaterEquationsWithTopo method) clamp_momentum (class in zoomy_core.model.kernel_functions) clamp_momentum() (zoomy_core.kernel.Kernel method) (zoomy_core.kernel.kernel.Kernel method) clamp_positive (class in zoomy_core.model.kernel_functions) clamp_positive() (zoomy_core.kernel.Kernel method) (zoomy_core.kernel.kernel.Kernel method) ClassifiedTerms (class in zoomy_core.model.models.legacy.pde_generator) classify() (zoomy_core.model.models.ins_generator.Expression method) classify_delta_terms() (zoomy_core.model.models.legacy.pde_generator.InterfaceRouter method) clean_files() (in module zoomy_core.misc.io) clear() (zoomy_core.model.models.legacy.basis_cache.BasisMatrixCache method) clear_cache() (zoomy_core.mesh.mesh_catalog.MeshCatalog method) clear_matrix_cache() (in module zoomy_core.model.models.derived_model) (in module zoomy_core.model.models.projected_model) compile_system_bcs() (in module zoomy_core.model.boundary_conditions) compile_time_s (zoomy_jax.fvm.solver_imex_jax.IMEXStats attribute) component (zoomy_core.model.models.zeta_projection.ZetaTerm attribute) compute_all_matrices() (zoomy_core.model.models.symbolic_integrator.SymbolicIntegrator method) compute_boundary_condition() (zoomy_core.model.aux_boundary_conditions.Extrapolation method) (zoomy_core.model.aux_boundary_conditions.Lambda method) (zoomy_core.model.boundary_conditions.BoundaryCondition method) (zoomy_core.model.boundary_conditions.CharacteristicReflective method) (zoomy_core.model.boundary_conditions.Extrapolation method) (zoomy_core.model.boundary_conditions.FromData method) (zoomy_core.model.boundary_conditions.InflowOutflow method) (zoomy_core.model.boundary_conditions.Lambda method) (zoomy_core.model.boundary_conditions.Periodic method) (zoomy_core.model.boundary_conditions.RoughWall method) (zoomy_core.model.boundary_conditions.Wall method)

compute_cell_gradients() (zoomy_core.fvm.reconstruction.FaceGradient method) compute_derivatives() (in module zoomy_core.mesh.lsq_reconstruction) (in module zoomy_jax.mesh.mesh) (zoomy_core.mesh.base_mesh.BaseMesh method) (zoomy_core.mesh.lsq_mesh.LSQMesh method) compute_dt (zoomy_core.fvm.solver_numpy.HyperbolicSolver attribute) compute_gaussian_weights() (in module zoomy_core.mesh.lsq_reconstruction) compute_inradius_generic() (in module zoomy_core.mesh.lsq_reconstruction) compute_subvolume() (in module zoomy_core.mesh.mesh_util) compute_timestep() (zoomy_jax.fvm.solver_jax.HyperbolicSolver method) conditional (class in zoomy_core.model.kernel_functions) conditional() (zoomy_core.kernel.Kernel method) (zoomy_core.kernel.kernel.Kernel method) Constant (class in zoomy_core.model.initial_conditions) constant() (in module zoomy_core.fvm.timestepping) ConstantReconstruction (class in zoomy_core.fvm.reconstruction) (class in zoomy_jax.fvm.reconstruction_jax) constants() (zoomy_core.model.initial_conditions.Constant method) contains() (zoomy_core.misc.misc.Zstruct method) continuity (zoomy_core.model.models.model_derivation.PreProjectedEquations attribute) (zoomy_core.model.models.vam_derivation.VAMPreProjectedEquations attribute) (zoomy_core.model.models.vam_zeta_projection.VAMZetaProjectedEquations attribute) (zoomy_core.model.models.zeta_projection.ZetaProjectedEquations attribute) continuity() (zoomy_core.model.models.legacy.pde_generator.INSBase method) continuity_closure (zoomy_core.model.models.vam_derivation.VAMPreProjectedEquations attribute) convective (zoomy_core.model.models.ins_generator.Expression property) convert_expression_body() (zoomy_core.transformation.generic_c.GenericCppBase method) convert_mesh_to_jax() (in module zoomy_jax.mesh.mesh) convert_mesh_type_to_meshio_mesh_type() (in module zoomy_core.mesh.mesh_util) CppModel (class in zoomy_core.transformation.generic_c) (class in zoomy_core.transformation.to_c) CppNumerics (class in zoomy_core.transformation.generic_c) (class in zoomy_core.transformation.to_c) create_1d() (zoomy_core.mesh.base_mesh.BaseMesh class method) (zoomy_core.mesh.fvm_mesh.FVMMesh class method) (zoomy_core.mesh.lsq_mesh.LSQMesh class method) (zoomy_core.mesh.subvolume_mesh.SubVolumeMesh class method) create_2d() (zoomy_core.mesh.base_mesh.BaseMesh class method) (zoomy_core.mesh.fvm_mesh.FVMMesh class method) (zoomy_core.mesh.lsq_mesh.LSQMesh class method) (zoomy_core.mesh.subvolume_mesh.SubVolumeMesh class method) create_3d() (zoomy_core.mesh.base_mesh.BaseMesh class method) (zoomy_core.mesh.fvm_mesh.FVMMesh class method) (zoomy_core.mesh.lsq_mesh.LSQMesh class method) (zoomy_core.mesh.subvolume_mesh.SubVolumeMesh class method) create_code() (zoomy_core.transformation.generic_c.GenericCppModel method) (zoomy_core.transformation.generic_c.GenericCppNumerics method) create_functions_from_list() (zoomy_core.model.analysis.ModelAnalyser method) create_halo_exchange() (in module zoomy_jax.fvm.halo_exchange) create_runtime() (zoomy_core.fvm.solver_numpy.Solver method) (zoomy_jax.fvm.solver_imex_jax.IMEXSourceSolverJax method) (zoomy_jax.fvm.solver_jax.HyperbolicSolver method) CsW (zoomy_core.model.boundary_conditions.RoughWall attribute)

D

D (zoomy_core.model.boundary_conditions.CharacteristicReflective attribute) default() (zoomy_core.misc.misc.Settings class method) default_assumptions (zoomy_core.model.kernel_functions.clamp_momentum attribute) (zoomy_core.model.kernel_functions.clamp_positive attribute) (zoomy_core.model.kernel_functions.conditional attribute) (zoomy_core.model.kernel_functions.max_wavespeed attribute) default_constant_func() (in module zoomy_core.model.initial_conditions) default_high_state() (in module zoomy_core.model.initial_conditions) default_low_state() (in module zoomy_core.model.initial_conditions) default_simplify() (in module zoomy_core.model.basemodel) default_user_function() (in module zoomy_core.model.initial_conditions) definition (zoomy_core.model.basefunction.Function attribute) delete_equations() (zoomy_core.model.analysis.ModelAnalyser method) depth_integrate() (zoomy_core.model.models.ins_generator.Expression method) DepthIntegralResult (class in zoomy_core.model.models.ins_generator) DepthIntegrate (class in zoomy_core.model.models.ins_generator) derivative_ansatz() (zoomy_core.model.models.legacy.pde_generator.LayeredAnsatz method) derivative_buffer_aux_names() (zoomy_core.model.derivative_workflow.StructuredDerivativeModel method) derivative_canonicalization (zoomy_core.model.derivative_workflow.StructuredDerivativeModel attribute) derivative_product() (zoomy_core.model.models.symbolic_integrator.SymbolicIntegrator method) DerivativeAwareHyperbolicSolver (class in zoomy_core.model.derivative_workflow) DerivativeAwareSolver (class in zoomy_core.model.derivative_workflow) DerivativeAwareSolverMixin (class in zoomy_core.model.derivative_workflow) DerivativeNamespace (class in zoomy_core.model.derivative_workflow) DerivativeSpec (class in zoomy_core.model.derivative_workflow) derive_model() (zoomy_core.model.models.derived_model.DerivedModel method) (zoomy_core.model.models.sme_model.INSModel method) (zoomy_core.model.models.sme_model.SMEInviscid method) (zoomy_core.model.models.sme_model.SMEModel method) (zoomy_core.model.models.vam_model.VAMModel method) (zoomy_core.model.models.vam_model.VAMNewtonian method) derive_shallow_moments() (in module zoomy_core.model.models.model_derivation) derive_vam_moments() (in module zoomy_core.model.models.vam_derivation)

DerivedModel (class in zoomy_core.model.models.derived_model) DerivedSystem (in module zoomy_core.model.models.derived_system) describe() (zoomy_core.model.models.derived_model.DerivedModel method) (zoomy_core.model.models.derived_system.System method) (zoomy_core.model.models.ins_generator.Expression method) Description (class in zoomy_core.misc.description) dflux() (zoomy_core.model.basemodel.Model method) diff() (zoomy_core.model.derivative_workflow.DerivativeNamespace method) DiffusionOperator (class in zoomy_core.fvm.reconstruction) DiffusionOperatorJAX (class in zoomy_jax.fvm.reconstruction_jax) diffusive_flux() (zoomy_core.model.basemodel.Model method) (zoomy_core.model.models.advection_model.ScalarAdvectionDiffusion method) dimension (zoomy_core.mesh.base_mesh.BaseMesh attribute) (zoomy_core.model.basemodel.Model attribute) (zoomy_core.model.models.legacy.shallow_water.ShallowWaterEquations attribute) (zoomy_core.model.models.legacy.shallow_water_topo.ShallowWaterEquationsWithTopo attribute) (zoomy_core.model.models.model_derivation.PreProjectedEquations attribute) (zoomy_core.model.models.vam_derivation.VAMPreProjectedEquations attribute) (zoomy_core.model.models.vam_zeta_projection.VAMZetaProjectedEquations attribute) (zoomy_core.model.models.zeta_projection.ZetaProjectedEquations attribute) (zoomy_jax.mesh.mesh.MeshJAX attribute) disable_differentiation (zoomy_core.model.basemodel.Model attribute) doit() (zoomy_core.model.models.ins_generator.Expression method) doprint() (zoomy_core.transformation.generic_c.GenericCppBase method) (zoomy_core.transformation.to_amrex.AmrexCore method) download() (zoomy_core.mesh.mesh_catalog.MeshCatalog method) download_async() (zoomy_core.mesh.mesh_catalog.MeshCatalog method) download_mesh() (in module zoomy_core.mesh.browse_meshes) download_mesh_async() (in module zoomy_core.mesh.browse_meshes) drop_groups() (zoomy_core.model.models.ins_generator.Expression method) dt() (zoomy_core.model.derivative_workflow.DerivativeNamespace method) dtxx() (zoomy_core.model.derivative_workflow.DerivativeNamespace method) dx() (zoomy_core.model.derivative_workflow.DerivativeNamespace method) dxx() (zoomy_core.model.derivative_workflow.DerivativeNamespace method)

E

edge_length() (in module zoomy_core.mesh.mesh_util) eigenvalue_dict_to_matrix() (in module zoomy_core.model.basemodel) eigenvalue_mode (zoomy_core.model.basemodel.Model attribute) (zoomy_core.model.models.sme_model.INSModel attribute) eigenvalue_regularization (zoomy_core.fvm.solver_numpy.HyperbolicSolver attribute) eigenvalue_regularization_eps (zoomy_core.model.legacy.numerical_model.NumericalModel property) eigenvalues() (zoomy_core.model.basemodel.Model method) (zoomy_core.model.legacy.numerical_model.NumericalModel method) (zoomy_core.model.models.advection_model.ScalarAdvection method) (zoomy_core.model.models.advection_model.ScalarAdvectionDiffusion method) (zoomy_core.model.models.ins3d_model.INS3DChorin method) (zoomy_core.model.models.legacy.shallow_water_topo.NumericalShallowWaterEquationsWithTopo method) (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlow method) (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlow2d method) (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlowPathconservative method) (zoomy_core.model.models.legacy.vam.VAMFullImplicit method) (zoomy_core.model.models.legacy.vam.VAMHyperbolic method) (zoomy_core.model.models.legacy.vam.VAMPoisson method) (zoomy_core.model.models.legacy.vam.VAMPoissonFull method) (zoomy_core.model.models.projected_model.ProjectedModel method) (zoomy_core.model.models.vam_model.VAMModel method) (zoomy_core.model.models.vam_projected_model.VAMProjectedHyperbolic method) ensure_lsq_mesh() (in module zoomy_core.mesh) entries (zoomy_core.mesh.mesh_catalog.MeshCatalog property) equation_names (zoomy_core.model.models.derived_system.SystemBoundaryConditions property)

equations (zoomy_core.model.models.derived_system.System attribute) eval() (zoomy_core.model.kernel_functions.clamp_momentum class method) (zoomy_core.model.kernel_functions.clamp_positive class method) (zoomy_core.model.kernel_functions.max_wavespeed class method) (zoomy_core.model.models.basisfunctions.Basisfunction method) eval_psi() (zoomy_core.model.models.basisfunctions.Basisfunction method) ex (zoomy_core.model.models.legacy.shallow_water.ShallowWaterEquations attribute) expand() (zoomy_core.model.models.ins_generator.Expression method) expand_neighbors() (in module zoomy_core.mesh.lsq_reconstruction) explicit() (zoomy_core.fvm.reconstruction.DiffusionOperator method) (zoomy_jax.fvm.reconstruction_jax.DiffusionOperatorJAX method) expr (zoomy_core.model.models.model_derivation.TaggedTerm attribute) Expression (class in zoomy_core.model.models.ins_generator) extract_local_mesh() (in module zoomy_jax.mesh.partition) extract_parameter_defaults() (in module zoomy_core.model.basemodel) Extrapolation (class in zoomy_core.model.aux_boundary_conditions) (class in zoomy_core.model.boundary_conditions) extrude_2d() (zoomy_core.mesh.base_mesh.BaseMesh class method) extrude_boundary_face_corresponding_element() (in module zoomy_core.mesh.mesh_extrude) extrude_boundary_face_tags() (in module zoomy_core.mesh.mesh_extrude) extrude_boundary_face_vertices() (in module zoomy_core.mesh.mesh_extrude) extrude_element_vertices() (in module zoomy_core.mesh.mesh_extrude) extrude_element_vertices_line() (in module zoomy_core.mesh.mesh_extrude) extrude_points() (in module zoomy_core.mesh.mesh_extrude) ey (zoomy_core.model.models.legacy.shallow_water.ShallowWaterEquations attribute) ez (zoomy_core.model.models.legacy.shallow_water.ShallowWaterEquations attribute)

F

face_areas() (in module zoomy_core.mesh.mesh_util) face_cells (zoomy_core.mesh.base_mesh.BaseMesh attribute) (zoomy_jax.mesh.mesh.MeshJAX attribute) face_centers (zoomy_core.mesh.fvm_mesh.FVMMesh property) (zoomy_jax.mesh.mesh.MeshJAX attribute) face_centers_computed() (zoomy_core.mesh.base_mesh.BaseMesh method) (zoomy_core.mesh.fvm_mesh.FVMMesh method) face_neighbors (zoomy_core.mesh.lsq_mesh.LSQMesh property) (zoomy_jax.mesh.mesh.MeshJAX attribute) face_normal_gradient() (zoomy_core.fvm.reconstruction.FaceGradient method) face_normals (zoomy_core.mesh.fvm_mesh.FVMMesh property) (zoomy_jax.mesh.mesh.MeshJAX attribute) face_normals() (in module zoomy_core.mesh.mesh_util) face_normals_computed() (zoomy_core.mesh.base_mesh.BaseMesh method) (zoomy_core.mesh.fvm_mesh.FVMMesh method) face_state() (zoomy_core.model.boundary_conditions.BoundaryCondition method) (zoomy_core.model.boundary_conditions.Extrapolation method) (zoomy_core.model.boundary_conditions.Wall method) face_subvolumes (zoomy_jax.mesh.mesh.MeshJAX attribute) face_subvolumes_computed() (zoomy_core.mesh.base_mesh.BaseMesh method) (zoomy_core.mesh.subvolume_mesh.SubVolumeMesh method) face_volumes (zoomy_core.mesh.fvm_mesh.FVMMesh property) (zoomy_jax.mesh.mesh.MeshJAX attribute) face_volumes_computed() (zoomy_core.mesh.base_mesh.BaseMesh method) (zoomy_core.mesh.fvm_mesh.FVMMesh method) FaceGradient (class in zoomy_core.fvm.reconstruction) fd_eps (zoomy_core.fvm.solver_imex_numpy.IMEXSolver attribute) (zoomy_jax.fvm.solver_imex_jax.IMEXSourceSolverJax attribute) fd_jvp() (in module zoomy_core.fvm.jvp_numpy) field (zoomy_core.model.derivative_workflow.DerivativeSpec attribute) field_map (zoomy_core.fvm.riemann_solvers.Numerics attribute) filename() (zoomy_core.mesh.mesh_catalog.MeshEntry method) find_derivative_indices() (in module zoomy_core.mesh.lsq_reconstruction) find_edge_index() (in module zoomy_core.mesh.mesh_util) find_singular_denominators() (zoomy_core.kernel.Kernel static method) (zoomy_core.kernel.kernel.Kernel static method) flat (zoomy_core.misc.misc.ZArray property) flatten() (zoomy_core.misc.misc.ZArray method) flatten_index() (in module zoomy_core.transformation.generic_c) Flux (class in zoomy_core.fvm.legacy.flux) (class in zoomy_jax.fvm.flux) flux() (zoomy_core.model.basemodel.Model method) (zoomy_core.model.legacy.numerical_model.NumericalModel method) (zoomy_core.model.models.advection_model.ScalarAdvection method) (zoomy_core.model.models.advection_model.ScalarAdvectionDiffusion method) (zoomy_core.model.models.derived_model.DerivedModel method) (zoomy_core.model.models.ins3d_model.INS3DChorin method) (zoomy_core.model.models.legacy.GN.GN method) (zoomy_core.model.models.legacy.shallow_water.ShallowWaterEquations method) (zoomy_core.model.models.legacy.shallow_water_topo.ShallowWaterEquationsWithTopo method) (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlow method) (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlow2d method) (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlowEnergy method) (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlowPathconservative method) (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlowPathconservative2 method) (zoomy_core.model.models.legacy.vam.VAMFullImplicit method) (zoomy_core.model.models.legacy.vam.VAMHyperbolic method) (zoomy_core.model.models.projected_model.ProjectedModel method) (zoomy_core.model.models.vam_model.VAMModel method) (zoomy_core.model.models.vam_projected_model.VAMProjectedHyperbolic method)

FoamModel (class in zoomy_core.transformation.to_openfoam) format_accessor() (zoomy_core.transformation.generic_c.GenericCppBase method) (zoomy_core.transformation.to_amrex.AmrexCore method) (zoomy_core.transformation.to_openfoam.FoamModel method) format_array_initialization() (zoomy_core.transformation.generic_c.GenericCppBase method) (zoomy_core.transformation.to_amrex.AmrexCore method) format_assignment() (zoomy_core.transformation.generic_c.GenericCppBase method) (zoomy_core.transformation.to_amrex.AmrexCore method) (zoomy_core.transformation.to_openfoam.FoamModel method) free_symbols (zoomy_core.model.models.ins_generator.Expression property) FreeSurfaceFlowSolver (class in zoomy_core.fvm.solver_numpy) FreeSurfaceMUSCL (class in zoomy_core.fvm.reconstruction) (class in zoomy_jax.fvm.reconstruction_jax) friction_paper() (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlow method) (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlow2d method) (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlowPathconservative method) from_base() (zoomy_core.mesh.fvm_mesh.FVMMesh class method) from_dict() (zoomy_core.misc.misc.Zstruct class method) from_fvm() (zoomy_core.mesh.lsq_mesh.LSQMesh class method) (zoomy_core.mesh.subvolume_mesh.SubVolumeMesh class method) from_hdf5() (zoomy_core.mesh.base_mesh.BaseMesh class method) (zoomy_core.mesh.fvm_mesh.FVMMesh class method) (zoomy_core.mesh.lsq_mesh.LSQMesh class method) (zoomy_core.mesh.subvolume_mesh.SubVolumeMesh class method) from_json() (zoomy_core.misc.misc.Settings class method) from_msh() (zoomy_core.mesh.base_mesh.BaseMesh class method) (zoomy_core.mesh.fvm_mesh.FVMMesh class method) (zoomy_core.mesh.lsq_mesh.LSQMesh class method) (zoomy_core.mesh.subvolume_mesh.SubVolumeMesh class method) FromData (class in zoomy_core.model.boundary_conditions) FSFIMEXSolver (class in zoomy_core.fvm.solver_imex_numpy) FSFSplittingSolver (class in zoomy_core.fvm.solver_splitting_numpy) full_ansatz() (zoomy_core.model.models.legacy.pde_generator.LayeredAnsatz method) full_args() (zoomy_core.model.models.legacy.pde_generator.INSBase method) full_equation() (zoomy_core.model.models.legacy.pde_generator.ProjectedEquation method) FullINS() (in module zoomy_core.model.models.ins_generator) Function (class in zoomy_core.model.basefunction) function (zoomy_core.model.initial_conditions.UserFunction attribute) FVMMesh (class in zoomy_core.mesh.fvm_mesh)

G

g (zoomy_core.model.models.legacy.shallow_water.ShallowWaterEquations attribute) GalerkinBasis (class in zoomy_core.model.models.basisfunctions) GalerkinProjection (class in zoomy_core.model.models.legacy.pde_generator) gauss_legendre_integrate() (in module zoomy_core.model.models.ins_generator) generate_vtk() (in module zoomy_core.misc.io) GenericCppBase (class in zoomy_core.transformation.generic_c) GenericCppModel (class in zoomy_core.transformation.generic_c) GenericCppNumerics (class in zoomy_core.transformation.generic_c) get() (zoomy_core.mesh.mesh_catalog.MeshCatalog method) (zoomy_core.model.models.basisfunctions.Basisfunction method) (zoomy_core.model.models.derived_system.SystemBoundaryConditions method) get_all() (zoomy_core.model.models.derived_system.SystemBoundaryConditions method) get_all_dof_symbols() (zoomy_core.model.models.legacy.pde_generator.LayeredAnsatz method) get_apply_boundary_conditions() (zoomy_core.fvm.solver_numpy.Solver method) (zoomy_jax.fvm.solver_jax.HyperbolicSolver method) get_array_declaration() (zoomy_core.transformation.generic_c.GenericCppBase method) (zoomy_core.transformation.to_amrex.AmrexCore method) get_array_type() (zoomy_core.transformation.generic_c.GenericCppBase method) (zoomy_core.transformation.to_amrex.AmrexCore method) get_bc_args() (zoomy_core.transformation.generic_c.GenericCppModel method) (zoomy_core.transformation.to_amrex.AmrexModel method) get_boundary_condition_function() (zoomy_core.model.boundary_conditions.BoundaryConditions method) get_boundary_names() (in module zoomy_core.mesh.browse_meshes) get_cached_matrices() (in module zoomy_core.model.models.derived_model) (in module zoomy_core.model.models.projected_model) get_compute_max_abs_eigenvalue() (zoomy_core.fvm.solver_numpy.HyperbolicSolver method) (zoomy_jax.fvm.solver_jax.HyperbolicSolver method) get_compute_source() (zoomy_core.fvm.solver_numpy.HyperbolicSolver method) (zoomy_jax.fvm.solver_jax.HyperbolicSolver method) get_compute_source_jacobian() (zoomy_jax.fvm.solver_jax.HyperbolicSolver method) get_compute_source_jacobian_wrt_variables() (zoomy_core.fvm.solver_numpy.HyperbolicSolver method) get_constraints() (zoomy_core.model.models.vam_projected_model.VAMProjectedPoisson method) get_definition() (zoomy_core.model.initial_conditions.Constant method) (zoomy_core.model.initial_conditions.InitialConditions method) (zoomy_core.model.initial_conditions.RadialDambreak method) (zoomy_core.model.initial_conditions.RestartFromHdf5 method) (zoomy_core.model.initial_conditions.RP method) (zoomy_core.model.initial_conditions.RP2d method) (zoomy_core.model.initial_conditions.RP3d method) (zoomy_core.model.initial_conditions.UserFunction method) get_diff_basis() (zoomy_core.model.models.basisfunctions.Basisfunction method) get_element_neighbors() (in module zoomy_core.mesh.mesh_util) get_eps() (zoomy_core.model.analysis.ModelAnalyser method) get_equations() (zoomy_core.model.analysis.ModelAnalyser method) get_extruded_mesh_type() (in module zoomy_core.mesh.mesh_util) get_field_map() (zoomy_core.model.legacy.numerical_model.NumericalModel method) get_file_footer() (zoomy_core.transformation.generic_c.GenericCppModel method) (zoomy_core.transformation.generic_c.GenericCppNumerics method) get_file_header() (zoomy_core.transformation.generic_c.GenericCppModel method) (zoomy_core.transformation.generic_c.GenericCppNumerics method) (zoomy_core.transformation.to_amrex.AmrexModel method) (zoomy_core.transformation.to_amrex.AmrexNumerics method) get_flux_operator() (zoomy_core.fvm.legacy.flux.Flux method) (zoomy_core.fvm.legacy.flux.LaxFriedrichs method) (zoomy_core.fvm.legacy.flux.Rusanov method) (zoomy_core.fvm.legacy.flux.Zero method) (zoomy_core.fvm.legacy.nonconservative_flux.NonconservativeFlux method) (zoomy_core.fvm.legacy.nonconservative_flux.Rusanov method) (zoomy_core.fvm.legacy.nonconservative_flux.Zero method) (zoomy_core.fvm.solver_numpy.HyperbolicSolver method) (zoomy_jax.fvm.flux.CenteredFlux method) (zoomy_jax.fvm.flux.Flux method) (zoomy_jax.fvm.flux.Rusanov method) (zoomy_jax.fvm.flux.Zero method) (zoomy_jax.fvm.nonconservative_flux.NonconservativeFlux method) (zoomy_jax.fvm.nonconservative_flux.Rusanov method) (zoomy_jax.fvm.nonconservative_flux.Zero method) (zoomy_jax.fvm.solver_jax.HyperbolicSolver method)

get_global_cell_index_from_vertices() (in module zoomy_core.mesh.mesh_util) get_hdf5_type() (in module zoomy_core.misc.io) get_includes() (zoomy_core.transformation.generic_c.GenericCppBase method) (zoomy_core.transformation.to_amrex.AmrexCore method) (zoomy_core.transformation.to_openfoam.FoamModel method) get_knot_spans() (zoomy_core.model.models.basisfunctions.SplineBasis method) get_lambda() (zoomy_core.model.models.basisfunctions.Basisfunction method) get_list() (zoomy_core.misc.misc.Zstruct method) get_main_directory() (in module zoomy_core.misc.misc) get_nested_shape() (in module zoomy_core.transformation.generic_c) get_or_compute() (zoomy_core.model.models.legacy.basis_cache.BasisMatrixCache method) get_path_integral_states() (zoomy_core.fvm.legacy.symbolic_numerics.NonconservativeRusanov method) (zoomy_core.fvm.legacy.symbolic_numerics.PositiveNonconservativeRusanov method) (zoomy_core.fvm.legacy.symbolic_numerics.PositiveQuasilinearRusanov method) (zoomy_core.fvm.riemann_solvers.NonconservativeRusanov method) (zoomy_core.fvm.riemann_solvers.PositiveNonconservativeRusanov method) (zoomy_core.fvm.riemann_solvers.PositiveQuasilinearRusanov method) get_physical_boundary_labels() (in module zoomy_core.mesh.lsq_reconstruction) get_polynomial_degree() (in module zoomy_core.mesh.lsq_reconstruction) get_primitives() (zoomy_core.model.models.derived_model.DerivedModel method) (zoomy_core.model.models.legacy.shallow_water_topo.NumericalShallowWaterEquationsWithTopo method) (zoomy_core.model.models.legacy.shallow_water_topo.ShallowWaterEquationsWithTopo method) (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlowPathconservative method) (zoomy_core.model.models.projected_model.ProjectedModel method) (zoomy_core.model.models.vam_model.VAMModel method) (zoomy_core.model.models.vam_projected_model.VAMProjectedHyperbolic method) get_required_monomials_count() (in module zoomy_core.mesh.lsq_reconstruction) get_residual() (zoomy_jax.fvm.solver_jax.PoissonSolver method) get_residual_equations() (zoomy_core.model.models.vam_projected_model.VAMProjectedPoisson method) get_save_fields() (in module zoomy_core.misc.io) (in module zoomy_jax.misc.io) get_save_fields_simple() (in module zoomy_core.misc.io) get_simple_array_def() (zoomy_core.transformation.generic_c.GenericCppBase method) (zoomy_core.transformation.to_amrex.AmrexCore method) get_time_space() (zoomy_core.model.analysis.ModelAnalyser method) get_variable_declaration() (zoomy_core.transformation.generic_c.GenericCppBase method) (zoomy_core.transformation.to_openfoam.FoamModel method) get_viscosity_identity_fluctuations() (zoomy_core.fvm.legacy.symbolic_numerics.Rusanov method) (zoomy_core.fvm.riemann_solvers.NonconservativeRusanov method) (zoomy_core.fvm.riemann_solvers.Rusanov method) get_viscosity_identity_flux() (zoomy_core.fvm.legacy.symbolic_numerics.Rusanov method) (zoomy_core.fvm.riemann_solvers.NonconservativeRusanov method) (zoomy_core.fvm.riemann_solvers.Rusanov method) ghost_cells (zoomy_jax.mesh.partition.PartitionInfo attribute), [1] global_to_local (zoomy_jax.mesh.partition.PartitionInfo attribute), [1] gmres_maxiter (zoomy_core.fvm.solver_imex_numpy.IMEXSolver attribute) (zoomy_jax.fvm.solver_imex_jax.IMEXSourceSolverJax attribute) gmres_tol (zoomy_core.fvm.solver_imex_numpy.IMEXSolver attribute) (zoomy_jax.fvm.solver_imex_jax.IMEXSourceSolverJax attribute) GN (class in zoomy_core.model.models.legacy.GN) gpu_enabled (zoomy_core.transformation.generic_c.GenericCppBase attribute)

H

HaloExchange (class in zoomy_jax.fvm.halo_exchange) has() (zoomy_core.model.models.ins_generator.Expression method) has_y (zoomy_core.model.models.ins_generator.StateSpace property) high() (zoomy_core.model.initial_conditions.RadialDambreak method) (zoomy_core.model.initial_conditions.RP method) (zoomy_core.model.initial_conditions.RP2d method) (zoomy_core.model.initial_conditions.RP3d method) horizontal_dim (zoomy_core.model.models.ins_generator.StateSpace property) (zoomy_core.model.models.model_derivation.PreProjectedEquations property) (zoomy_core.model.models.vam_derivation.VAMPreProjectedEquations property) (zoomy_core.model.models.vam_zeta_projection.VAMZetaProjectedEquations property) (zoomy_core.model.models.zeta_projection.ZetaProjectedEquations property) hydrostatic_pressure (zoomy_core.model.models.ins_generator.assumptions attribute)

hydrostatic_pressure() (zoomy_core.model.basemodel.Model method) (zoomy_core.model.legacy.numerical_model.NumericalModel method) (zoomy_core.model.models.derived_model.DerivedModel method) (zoomy_core.model.models.legacy.pde_generator.INSBase method) (zoomy_core.model.models.projected_model.ProjectedModel method) (zoomy_core.model.models.vam_model.VAMModel method) hydrostatic_pressure_gradient() (zoomy_core.model.models.legacy.pde_generator.BoundaryConditions method) hydrostatic_reconstruction() (zoomy_core.fvm.legacy.symbolic_numerics.PositiveRusanov method) (zoomy_core.fvm.riemann_solvers.PositiveRusanov method) hydrostatic_scaling() (in module zoomy_core.model.models.sme_model) HydrostaticPressure (class in zoomy_core.model.models.ins_generator) HyperbolicSolver (class in zoomy_core.fvm.solver_numpy) (class in zoomy_jax.fvm.solver_jax)

I

ibp() (zoomy_core.model.models.ins_generator.Expression method) IBPResult (class in zoomy_core.model.models.ins_generator) IMEXSolver (class in zoomy_core.fvm.solver_imex_numpy) IMEXSourceSolverJax (class in zoomy_jax.fvm.solver_imex_jax) IMEXStats (class in zoomy_core.fvm.solver_imex_numpy) (class in zoomy_jax.fvm.solver_imex_jax) implicit_calls (zoomy_core.fvm.solver_imex_numpy.IMEXStats attribute) (zoomy_jax.fvm.solver_imex_jax.IMEXStats attribute) implicit_maxiter (zoomy_core.fvm.solver_imex_numpy.IMEXSolver attribute) (zoomy_jax.fvm.solver_imex_jax.IMEXSourceSolverJax attribute) implicit_solve() (zoomy_core.fvm.reconstruction.DiffusionOperator method) (zoomy_jax.fvm.reconstruction_jax.DiffusionOperatorJAX method) implicit_solve_gmres() (zoomy_jax.fvm.reconstruction_jax.DiffusionOperatorJAX method) implicit_time_s (zoomy_core.fvm.solver_imex_numpy.IMEXStats attribute) (zoomy_jax.fvm.solver_imex_jax.IMEXStats attribute) implicit_tol (zoomy_core.fvm.solver_imex_numpy.IMEXSolver attribute) (zoomy_jax.fvm.solver_imex_jax.IMEXSourceSolverJax attribute) INERTIA (zoomy_core.model.models.zeta_projection.TermType attribute) InflowOutflow (class in zoomy_core.model.boundary_conditions) init_output_directory() (in module zoomy_core.misc.io) init_time_s (zoomy_core.fvm.solver_imex_numpy.IMEXStats attribute) (zoomy_jax.fvm.solver_imex_jax.IMEXStats attribute) initial_aux_condition() (zoomy_core.model.basemodel.Model method) initial_condition() (zoomy_core.model.basemodel.Model method) initial_conditions (zoomy_core.model.basemodel.Model attribute) InitialConditions (class in zoomy_core.model.initial_conditions) initialize() (zoomy_core.fvm.solver_numpy.HyperbolicSolver method) (zoomy_core.fvm.solver_numpy.Solver method) inradius() (in module zoomy_core.mesh.mesh_util) INS3DChorin (class in zoomy_core.model.models.ins3d_model) ins_dimension (zoomy_core.model.models.sme_model.INSModel attribute)

INSBase (class in zoomy_core.model.models.legacy.pde_generator) insert_plane_wave_ansatz() (zoomy_core.model.analysis.ModelAnalyser method) INSModel (class in zoomy_core.model.models.sme_model) Integrate (class in zoomy_core.model.models.ins_generator) integrate (zoomy_core.model.models.ins_generator.IBPResult attribute) integrate() (zoomy_core.model.models.legacy.pde_generator.PiecewiseIntegrator method) (zoomy_core.model.models.symbolic_integrator.SymbolicIntegrator method) integrate_by_parts() (in module zoomy_core.model.models.ins_generator) integrate_projected() (zoomy_core.model.models.legacy.pde_generator.LayeredAnsatz method) integration_order (zoomy_core.fvm.legacy.symbolic_numerics.NonconservativeRusanov attribute) (zoomy_core.fvm.riemann_solvers.NonconservativeRusanov attribute) InterfaceJump (class in zoomy_core.model.models.legacy.pde_generator) InterfaceRouter (class in zoomy_core.model.models.legacy.pde_generator) interpolate() (zoomy_core.model.basemodel.Model method) Inviscid (class in zoomy_core.model.models.ins_generator) inviscid (zoomy_core.model.models.ins_generator.materials attribute) is_commutative (zoomy_core.model.kernel_functions.clamp_momentum attribute) (zoomy_core.model.kernel_functions.clamp_positive attribute) (zoomy_core.model.kernel_functions.conditional attribute) (zoomy_core.model.kernel_functions.max_wavespeed attribute) is_complex (zoomy_core.model.kernel_functions.max_wavespeed attribute) is_extended_negative (zoomy_core.model.kernel_functions.max_wavespeed attribute) is_extended_nonnegative (zoomy_core.model.kernel_functions.max_wavespeed attribute) is_extended_real (zoomy_core.model.kernel_functions.max_wavespeed attribute) is_finite (zoomy_core.model.kernel_functions.max_wavespeed attribute) is_hermitian (zoomy_core.model.kernel_functions.max_wavespeed attribute) is_imaginary (zoomy_core.model.kernel_functions.max_wavespeed attribute) is_infinite (zoomy_core.model.kernel_functions.max_wavespeed attribute) is_negative (zoomy_core.model.kernel_functions.max_wavespeed attribute) is_nonnegative (zoomy_core.model.kernel_functions.max_wavespeed attribute) is_real (zoomy_core.model.kernel_functions.max_wavespeed attribute) items() (zoomy_core.misc.misc.Zstruct method)

J

JaxRuntimeModel (class in zoomy_jax.transformation.to_jax) JaxRuntimeSymbolic (class in zoomy_jax.transformation.to_jax) jump_position_x (zoomy_core.model.initial_conditions.RP attribute) (zoomy_core.model.initial_conditions.RP2d attribute) (zoomy_core.model.initial_conditions.RP3d attribute)

jump_position_y (zoomy_core.model.initial_conditions.RP2d attribute) (zoomy_core.model.initial_conditions.RP3d attribute) jump_position_z (zoomy_core.model.initial_conditions.RP3d attribute) jv_backend (zoomy_core.fvm.solver_imex_numpy.IMEXSolver attribute) (zoomy_jax.fvm.solver_imex_jax.IMEXSourceSolverJax attribute)

K

keep_groups() (zoomy_core.model.models.ins_generator.Expression method) Kernel (class in zoomy_core.kernel) (class in zoomy_core.kernel.kernel) key (zoomy_core.model.derivative_workflow.DerivativeSpec property) keys() (zoomy_core.misc.misc.Zstruct method) kinematic_bc_bottom (zoomy_core.model.models.ins_generator.assumptions attribute)

kinematic_bc_surface (zoomy_core.model.models.ins_generator.assumptions attribute) kinematic_bottom() (zoomy_core.model.models.legacy.pde_generator.BoundaryConditions method) kinematic_surface() (zoomy_core.model.models.legacy.pde_generator.BoundaryConditions method) KinematicBCBottom (class in zoomy_core.model.models.ins_generator) KinematicBCSurface (class in zoomy_core.model.models.ins_generator) Ks (zoomy_core.model.boundary_conditions.RoughWall attribute)

L

L (zoomy_core.model.boundary_conditions.CharacteristicReflective attribute) Lambda (class in zoomy_core.model.aux_boundary_conditions) (class in zoomy_core.model.boundary_conditions) latex() (zoomy_core.model.models.ins_generator.Expression method) latex_str (zoomy_core.model.models.zeta_projection.ZetaTerm attribute) latex_system() (zoomy_core.model.models.vam_zeta_projection.VAMZetaProjectedEquations method) (zoomy_core.model.models.zeta_projection.ZetaProjectedEquations method) LaxFriedrichs (class in zoomy_core.fvm.legacy.flux) layer_thickness() (zoomy_core.model.models.legacy.pde_generator.LayeredAnsatz method) LayeredAnsatz (class in zoomy_core.model.models.legacy.pde_generator) least_squares_reconstruction_local() (in module zoomy_core.mesh.lsq_reconstruction) left_eigenvectors() (zoomy_core.model.basemodel.Model method) Legendre_DN (class in zoomy_core.model.models.basisfunctions) Legendre_shifted (class in zoomy_core.model.models.basisfunctions) length() (zoomy_core.misc.misc.Zstruct method) level (zoomy_core.model.models.derived_model.DerivedModel attribute) (zoomy_core.model.models.projected_model.ProjectedModel attribute) (zoomy_core.model.models.vam_projected_model.VAMProjectedHyperbolic attribute) limiter (zoomy_core.fvm.solver_numpy.HyperbolicSolver attribute) linearize_from_quasilinear() (zoomy_core.model.analysis_linear.LinearWaveAnalyser method) linearize_system() (zoomy_core.model.analysis.ModelAnalyser method) LinearWaveAnalyser (class in zoomy_core.model.analysis_linear) list() (zoomy_core.mesh.mesh_catalog.MeshCatalog method) list_entries() (zoomy_core.model.models.legacy.basis_cache.BasisMatrixCache method) list_sorted_function_names (zoomy_core.model.boundary_conditions.BoundaryConditions property) listify() (in module zoomy_core.model.basefunction) load() (zoomy_core.mesh.mesh_catalog.MeshCatalog method) (zoomy_core.model.models.derived_system.System class method) load_async() (zoomy_core.mesh.mesh_catalog.MeshCatalog method)

load_fields_from_hdf5() (in module zoomy_core.misc.io) load_hdf5_to_dict() (in module zoomy_core.misc.io) load_mesh_from_hdf5() (in module zoomy_core.misc.io) load_settings() (in module zoomy_core.misc.io) load_settings2() (in module zoomy_core.misc.io) load_timeline_of_fields_from_hdf5() (in module zoomy_core.misc.io) local_coordinate() (zoomy_core.model.models.legacy.pde_generator.LayeredAnsatz method) local_faces (zoomy_jax.mesh.partition.PartitionInfo attribute), [1] local_max_abs_eigenvalue() (zoomy_core.fvm.legacy.symbolic_numerics.Numerics method) (zoomy_core.fvm.riemann_solvers.Numerics method) local_max_eigenvalue_definition() (zoomy_core.fvm.legacy.symbolic_numerics.Numerics method) (zoomy_core.fvm.riemann_solvers.Numerics method) log_callback_execution_time() (in module zoomy_jax.fvm.solver_jax) log_callback_hyperbolic() (in module zoomy_jax.fvm.solver_jax) log_callback_poisson() (in module zoomy_jax.fvm.solver_jax) log_every (zoomy_core.fvm.legacy.projection_solver.ProjectionSolver attribute) low() (zoomy_core.model.initial_conditions.RadialDambreak method) (zoomy_core.model.initial_conditions.RP method) (zoomy_core.model.initial_conditions.RP2d method) (zoomy_core.model.initial_conditions.RP3d method) lsq_gradQ (zoomy_core.mesh.lsq_mesh.LSQMesh property) (zoomy_jax.mesh.mesh.MeshJAX attribute) lsq_monomial_multi_index (zoomy_core.mesh.lsq_mesh.LSQMesh property) (zoomy_jax.mesh.mesh.MeshJAX attribute) lsq_neighbors (zoomy_core.mesh.lsq_mesh.LSQMesh property) (zoomy_jax.mesh.mesh.MeshJAX attribute) lsq_scale_factors (zoomy_core.mesh.lsq_mesh.LSQMesh property) (zoomy_jax.mesh.mesh.MeshJAX attribute) LSQMesh (class in zoomy_core.mesh.lsq_mesh)

M

M (zoomy_core.model.boundary_conditions.CharacteristicReflective attribute) make_derivative_symbols() (zoomy_core.model.models.vam_projected_model.VAMProjectedPoisson method) manning_friction_term() (zoomy_core.model.models.legacy.shallow_water.ShallowWaterEquations method) manning_n (zoomy_core.model.models.legacy.shallow_water.ShallowWaterEquations attribute) map() (zoomy_core.model.models.ins_generator.Expression method) map_fields (zoomy_core.model.initial_conditions.RestartFromHdf5 attribute) map_with_bcs() (zoomy_core.model.models.ins_generator.Expression method) MASS_FLUX (zoomy_core.model.models.vam_zeta_projection.VAMTermType attribute) (zoomy_core.model.models.zeta_projection.TermType attribute) MASS_FLUX_Y (zoomy_core.model.models.zeta_projection.TermType attribute) mass_matrix() (zoomy_core.model.models.derived_model.DerivedModel method) (zoomy_core.model.models.projected_model.ProjectedModel method) (zoomy_core.model.models.symbolic_integrator.SymbolicIntegrator method) (zoomy_core.model.models.vam_model.VAMModel method) (zoomy_core.model.models.vam_projected_model.VAMProjectedHyperbolic method) mass_matrix_inverse() (zoomy_core.model.models.derived_model.DerivedModel method) (zoomy_core.model.models.projected_model.ProjectedModel method) (zoomy_core.model.models.vam_model.VAMModel method) (zoomy_core.model.models.vam_projected_model.VAMProjectedHyperbolic method) MASS_TEMPORAL (zoomy_core.model.models.vam_zeta_projection.VAMTermType attribute) (zoomy_core.model.models.zeta_projection.TermType attribute) Material (class in zoomy_core.model.models.ins_generator) material (zoomy_core.model.models.projected_model.ProjectedModel attribute) materials (class in zoomy_core.model.models.ins_generator) math_namespace (zoomy_core.transformation.generic_c.GenericCppBase attribute) matrix_deps (zoomy_core.model.models.zeta_projection.ZetaTerm attribute) max_wavespeed (class in zoomy_core.model.kernel_functions) mean_coefficients() (zoomy_core.model.models.basisfunctions.Basisfunction method) (zoomy_core.model.models.basisfunctions.SplineBasis method) (zoomy_core.model.models.projected_model.ProjectedModel method) MEAN_VELOCITY_NC (zoomy_core.model.models.zeta_projection.TermType attribute) mesh_identical (zoomy_core.model.initial_conditions.RestartFromHdf5 attribute) mesh_new (zoomy_core.model.initial_conditions.RestartFromHdf5 attribute) MeshCatalog (class in zoomy_core.mesh.mesh_catalog) MeshEntry (class in zoomy_core.mesh.mesh_catalog) MeshJAX (class in zoomy_jax.mesh.mesh) min_dt (zoomy_core.fvm.solver_numpy.HyperbolicSolver attribute) Model (class in zoomy_core.model.basemodel) model (zoomy_core.fvm.legacy.symbolic_numerics.Numerics attribute) (zoomy_core.fvm.riemann_solvers.Numerics attribute) ModelAnalyser (class in zoomy_core.model.analysis) module zoomy_core zoomy_core.decorators zoomy_core.decorators.decorators zoomy_core.fvm zoomy_core.fvm.jvp_numpy zoomy_core.fvm.legacy zoomy_core.fvm.legacy.flux zoomy_core.fvm.legacy.nonconservative_flux zoomy_core.fvm.legacy.projection_solver zoomy_core.fvm.legacy.symbolic_numerics zoomy_core.fvm.ode zoomy_core.fvm.reconstruction zoomy_core.fvm.riemann_solvers zoomy_core.fvm.solver_imex_numpy zoomy_core.fvm.solver_numpy zoomy_core.fvm.solver_splitting_numpy zoomy_core.fvm.timestepping zoomy_core.kernel zoomy_core.kernel.kernel zoomy_core.mesh zoomy_core.mesh.base_mesh zoomy_core.mesh.browse_meshes zoomy_core.mesh.derivatives zoomy_core.mesh.fvm_mesh zoomy_core.mesh.lsq_mesh zoomy_core.mesh.lsq_reconstruction zoomy_core.mesh.mesh_catalog zoomy_core.mesh.mesh_extrude zoomy_core.mesh.mesh_util zoomy_core.mesh.subvolume_mesh zoomy_core.misc zoomy_core.misc.custom_types zoomy_core.misc.description zoomy_core.misc.interpolation zoomy_core.misc.io zoomy_core.misc.logger_config zoomy_core.misc.misc zoomy_core.misc.save_session zoomy_core.model zoomy_core.model.analysis zoomy_core.model.analysis_linear zoomy_core.model.aux_boundary_conditions zoomy_core.model.basefunction zoomy_core.model.basemodel zoomy_core.model.boundary_conditions zoomy_core.model.derivative_workflow zoomy_core.model.initial_conditions zoomy_core.model.kernel_functions zoomy_core.model.legacy zoomy_core.model.legacy.numerical_model zoomy_core.model.models zoomy_core.model.models.advection_model zoomy_core.model.models.basisfunctions zoomy_core.model.models.derived_model zoomy_core.model.models.derived_system zoomy_core.model.models.ins3d_model zoomy_core.model.models.ins_generator zoomy_core.model.models.legacy zoomy_core.model.models.legacy.basis_cache zoomy_core.model.models.legacy.GN zoomy_core.model.models.legacy.pde_generator zoomy_core.model.models.legacy.shallow_water zoomy_core.model.models.legacy.shallow_water_topo zoomy_core.model.models.legacy.shear_shallow_flow zoomy_core.model.models.legacy.vam zoomy_core.model.models.model_derivation zoomy_core.model.models.projected_model zoomy_core.model.models.sme_model zoomy_core.model.models.symbolic_integrator zoomy_core.model.models.vam_derivation zoomy_core.model.models.vam_model zoomy_core.model.models.vam_projected_model zoomy_core.model.models.vam_zeta_projection zoomy_core.model.models.zeta_projection zoomy_core.postprocessing zoomy_core.postprocessing.postprocessing zoomy_core.preprocessing zoomy_core.transformation zoomy_core.transformation.generic_c zoomy_core.transformation.helpers zoomy_core.transformation.to_amrex zoomy_core.transformation.to_c zoomy_core.transformation.to_numpy zoomy_core.transformation.to_openfoam zoomy_core.transformation.to_ufl zoomy_jax zoomy_jax.fvm zoomy_jax.fvm.flux zoomy_jax.fvm.halo_exchange zoomy_jax.fvm.jvp_jax zoomy_jax.fvm.nonconservative_flux zoomy_jax.fvm.ode zoomy_jax.fvm.reconstruction_jax zoomy_jax.fvm.solver_imex_jax zoomy_jax.fvm.solver_jax zoomy_jax.mesh zoomy_jax.mesh.mesh zoomy_jax.mesh.partition zoomy_jax.misc zoomy_jax.misc.io zoomy_jax.transformation zoomy_jax.transformation.to_jax

module (zoomy_core.transformation.to_numpy.NumpyRuntimeModel attribute) (zoomy_core.transformation.to_ufl.UFLRuntimeModel attribute) (zoomy_jax.transformation.to_jax.JaxRuntimeModel attribute) (zoomy_jax.transformation.to_jax.JaxRuntimeSymbolic attribute) momentum_equations (zoomy_core.model.boundary_conditions.WallMomentumBC property) momentum_equations() (zoomy_core.model.models.legacy.pde_generator.INSBase method) momentum_field_indices (zoomy_core.model.boundary_conditions.Wall attribute) Monomials (class in zoomy_core.model.models.basisfunctions) MUSCLReconstruction (class in zoomy_core.fvm.reconstruction) (class in zoomy_jax.fvm.reconstruction_jax)

N

n_boundary (zoomy_core.model.models.legacy.pde_generator.ClassifiedTerms property) n_boundary_faces (zoomy_core.mesh.base_mesh.BaseMesh attribute) (zoomy_jax.mesh.mesh.MeshJAX attribute) n_cells (zoomy_core.mesh.base_mesh.BaseMesh attribute) (zoomy_jax.mesh.mesh.MeshJAX attribute) n_faces (zoomy_core.mesh.base_mesh.BaseMesh attribute) (zoomy_jax.mesh.mesh.MeshJAX attribute) n_faces_per_cell (zoomy_core.mesh.base_mesh.BaseMesh attribute) (zoomy_jax.mesh.mesh.MeshJAX attribute) n_inner_cells (zoomy_core.mesh.base_mesh.BaseMesh attribute) (zoomy_jax.mesh.mesh.MeshJAX attribute) n_internal (zoomy_core.model.models.legacy.pde_generator.ClassifiedTerms property) n_layers (zoomy_core.model.models.derived_model.DerivedModel attribute) (zoomy_core.model.models.projected_model.ProjectedModel attribute) n_steps (zoomy_core.fvm.solver_imex_numpy.IMEXStats attribute) (zoomy_jax.fvm.solver_imex_jax.IMEXStats attribute) n_vertices (zoomy_core.mesh.base_mesh.BaseMesh attribute) (zoomy_jax.mesh.mesh.MeshJAX attribute) name (zoomy_core.fvm.legacy.projection_solver.ProjectionSolver attribute) (zoomy_core.fvm.legacy.symbolic_numerics.NonconservativeRusanov attribute) (zoomy_core.fvm.legacy.symbolic_numerics.Numerics attribute) (zoomy_core.fvm.legacy.symbolic_numerics.PositiveNonconservativeRusanov attribute) (zoomy_core.fvm.legacy.symbolic_numerics.PositiveQuasilinearRusanov attribute) (zoomy_core.fvm.legacy.symbolic_numerics.PositiveRusanov attribute) (zoomy_core.fvm.legacy.symbolic_numerics.QuasilinearRusanov attribute) (zoomy_core.fvm.legacy.symbolic_numerics.Rusanov attribute) (zoomy_core.fvm.riemann_solvers.NonconservativeRusanov attribute) (zoomy_core.fvm.riemann_solvers.Numerics attribute) (zoomy_core.fvm.riemann_solvers.PositiveNonconservativeRusanov attribute) (zoomy_core.fvm.riemann_solvers.PositiveQuasilinearRusanov attribute) (zoomy_core.fvm.riemann_solvers.PositiveRusanov attribute) (zoomy_core.fvm.riemann_solvers.QuasilinearRusanov attribute) (zoomy_core.fvm.riemann_solvers.Rusanov attribute) (zoomy_core.fvm.solver_imex_numpy.FSFIMEXSolver attribute) (zoomy_core.fvm.solver_imex_numpy.IMEXSolver attribute) (zoomy_core.fvm.solver_numpy.FreeSurfaceFlowSolver attribute) (zoomy_core.fvm.solver_numpy.HyperbolicSolver attribute) (zoomy_core.fvm.solver_numpy.Solver attribute) (zoomy_core.fvm.solver_splitting_numpy.FSFSplittingSolver attribute) (zoomy_core.fvm.solver_splitting_numpy.SplittingSolver attribute) (zoomy_core.kernel.Kernel attribute) (zoomy_core.kernel.kernel.Kernel attribute) (zoomy_core.mesh.base_mesh.BaseMesh attribute) (zoomy_core.mesh.fvm_mesh.FVMMesh attribute) (zoomy_core.mesh.lsq_mesh.LSQMesh attribute) (zoomy_core.mesh.mesh_catalog.MeshEntry attribute) (zoomy_core.mesh.subvolume_mesh.SubVolumeMesh attribute) (zoomy_core.model.aux_boundary_conditions.Extrapolation attribute) (zoomy_core.model.aux_boundary_conditions.Lambda attribute) (zoomy_core.model.basefunction.Function attribute) (zoomy_core.model.basemodel.Model attribute) (zoomy_core.model.boundary_conditions.BoundaryCondition attribute) (zoomy_core.model.boundary_conditions.BoundaryConditions attribute) (zoomy_core.model.boundary_conditions.CharacteristicReflective attribute) (zoomy_core.model.boundary_conditions.Extrapolation attribute) (zoomy_core.model.boundary_conditions.FromData attribute) (zoomy_core.model.boundary_conditions.InflowOutflow attribute) (zoomy_core.model.boundary_conditions.Lambda attribute) (zoomy_core.model.boundary_conditions.Periodic attribute) (zoomy_core.model.boundary_conditions.RoughWall attribute) (zoomy_core.model.boundary_conditions.Wall attribute) (zoomy_core.model.derivative_workflow.DerivativeAwareHyperbolicSolver attribute) (zoomy_core.model.derivative_workflow.DerivativeAwareSolver attribute) (zoomy_core.model.initial_conditions.Constant attribute) (zoomy_core.model.initial_conditions.InitialConditions attribute) (zoomy_core.model.initial_conditions.RadialDambreak attribute) (zoomy_core.model.initial_conditions.RestartFromHdf5 attribute) (zoomy_core.model.initial_conditions.RP attribute) (zoomy_core.model.initial_conditions.RP2d attribute) (zoomy_core.model.initial_conditions.RP3d attribute) (zoomy_core.model.initial_conditions.UserFunction attribute) (zoomy_core.model.models.basisfunctions.Basisfunction attribute) (zoomy_core.model.models.basisfunctions.Chebyshevu attribute) (zoomy_core.model.models.basisfunctions.Chebyshevu_shifted attribute) (zoomy_core.model.models.basisfunctions.GalerkinBasis attribute) (zoomy_core.model.models.basisfunctions.Legendre_DN attribute) (zoomy_core.model.models.basisfunctions.Legendre_shifted attribute) (zoomy_core.model.models.basisfunctions.Monomials attribute) (zoomy_core.model.models.basisfunctions.OrthogonalSplineWithConstant attribute) (zoomy_core.model.models.basisfunctions.Spline attribute) (zoomy_core.model.models.basisfunctions.SplineBasis attribute) (zoomy_core.model.models.derived_system.System attribute) (zoomy_core.model.models.legacy.pde_generator.ProjectedEquation attribute) (zoomy_jax.fvm.solver_imex_jax.IMEXSourceSolverJax attribute) (zoomy_jax.fvm.solver_jax.HyperbolicSolver attribute) (zoomy_jax.fvm.solver_jax.PoissonSolver attribute)

names() (zoomy_core.mesh.mesh_catalog.MeshCatalog method) nargs (zoomy_core.model.kernel_functions.clamp_momentum attribute) (zoomy_core.model.kernel_functions.clamp_positive attribute) (zoomy_core.model.kernel_functions.conditional attribute) navier_slip() (zoomy_core.model.models.derived_model.DerivedModel method) newton_solver() (in module zoomy_jax.fvm.solver_jax) Newtonian (class in zoomy_core.model.models.ins_generator) newtonian (zoomy_core.model.models.ins_generator.materials attribute) newtonian() (zoomy_core.model.models.projected_model.ProjectedModel method) newtonian_friction_term() (zoomy_core.model.models.legacy.shallow_water.ShallowWaterEquations method) newtonian_viscosity() (zoomy_core.model.models.derived_model.DerivedModel method) nonconservative_matrix() (zoomy_core.model.basemodel.Model method) (zoomy_core.model.legacy.numerical_model.NumericalModel method) (zoomy_core.model.models.derived_model.DerivedModel method) (zoomy_core.model.models.legacy.shallow_water_topo.ShallowWaterEquationsWithTopo method) (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlow method) (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlow2d method) (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlowEnergy method) (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlowPathconservative method) (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlowPathconservative2 method) (zoomy_core.model.models.legacy.vam.VAMFullImplicit method) (zoomy_core.model.models.legacy.vam.VAMHyperbolic method) (zoomy_core.model.models.projected_model.ProjectedModel method) (zoomy_core.model.models.vam_model.VAMModel method) (zoomy_core.model.models.vam_projected_model.VAMProjectedHyperbolic method) NonconservativeFlux (class in zoomy_core.fvm.legacy.nonconservative_flux) (class in zoomy_jax.fvm.nonconservative_flux) NonconservativeRusanov (class in zoomy_core.fvm.legacy.symbolic_numerics) (class in zoomy_core.fvm.riemann_solvers) (class in zoomy_jax.fvm.nonconservative_flux) nu (zoomy_core.model.models.ins3d_model.INS3DChorin attribute) (zoomy_core.model.models.legacy.shallow_water.ShallowWaterEquations attribute) numerical_fluctuations() (zoomy_core.fvm.legacy.symbolic_numerics.NonconservativeRusanov method) (zoomy_core.fvm.legacy.symbolic_numerics.Numerics method) (zoomy_core.fvm.legacy.symbolic_numerics.PositiveRusanov method) (zoomy_core.fvm.riemann_solvers.NonconservativeRusanov method) (zoomy_core.fvm.riemann_solvers.Numerics method) (zoomy_core.fvm.riemann_solvers.PositiveRusanov method) numerical_flux() (zoomy_core.fvm.legacy.symbolic_numerics.Numerics method) (zoomy_core.fvm.legacy.symbolic_numerics.PositiveQuasilinearRusanov method) (zoomy_core.fvm.legacy.symbolic_numerics.PositiveRusanov method) (zoomy_core.fvm.legacy.symbolic_numerics.QuasilinearRusanov method) (zoomy_core.fvm.legacy.symbolic_numerics.Rusanov method) (zoomy_core.fvm.riemann_solvers.Numerics method) (zoomy_core.fvm.riemann_solvers.PositiveQuasilinearRusanov method) (zoomy_core.fvm.riemann_solvers.PositiveRusanov method) (zoomy_core.fvm.riemann_solvers.QuasilinearRusanov method) (zoomy_core.fvm.riemann_solvers.Rusanov method) NumericalModel (class in zoomy_core.model.legacy.numerical_model) NumericalShallowWaterEquationsWithTopo (class in zoomy_core.model.models.legacy.shallow_water_topo) Numerics (class in zoomy_core.fvm.legacy.symbolic_numerics) (class in zoomy_core.fvm.riemann_solvers) NumpyRuntimeModel (class in zoomy_core.transformation.to_numpy) NumpyRuntimeSymbolic (class in zoomy_core.transformation.to_numpy)

O

Operation (class in zoomy_core.model.models.ins_generator) origin (zoomy_core.model.models.model_derivation.TaggedTerm attribute) (zoomy_core.model.models.zeta_projection.ZetaTerm attribute)

OrthogonalSplineWithConstant (class in zoomy_core.model.models.basisfunctions) owned_cells (zoomy_jax.mesh.partition.PartitionInfo attribute), [1]

P

par() (zoomy_core.kernel.Kernel method) (zoomy_core.kernel.kernel.Kernel method) parameters (zoomy_core.model.basemodel.Model attribute) (zoomy_core.model.models.legacy.shallow_water_topo.ShallowWaterEquationsWithTopo attribute) parse_definition_to_zstruct() (in module zoomy_core.model.basemodel) partition_mesh() (in module zoomy_jax.mesh.partition) PartitionInfo (class in zoomy_jax.mesh.partition) path_to_fields (zoomy_core.model.initial_conditions.RestartFromHdf5 attribute) path_to_old_mesh (zoomy_core.model.initial_conditions.RestartFromHdf5 attribute) Periodic (class in zoomy_core.model.boundary_conditions) periodic_to_physical_tag (zoomy_core.model.boundary_conditions.Periodic attribute) permeability (zoomy_core.model.boundary_conditions.Wall attribute) PiecewiseIntegrator (class in zoomy_core.model.models.legacy.pde_generator) plot() (zoomy_core.model.models.basisfunctions.Basisfunction method) poisson (zoomy_core.model.models.vam_zeta_projection.VAMZetaProjectedEquations attribute) POISSON_I1 (zoomy_core.model.models.vam_zeta_projection.VAMTermType attribute) POISSON_I2 (zoomy_core.model.models.vam_zeta_projection.VAMTermType attribute) poisson_iterations (zoomy_core.fvm.legacy.projection_solver.ProjectionSolver attribute) poisson_tol (zoomy_core.fvm.legacy.projection_solver.ProjectionSolver attribute) PoissonSolver (class in zoomy_jax.fvm.solver_jax) positive_variables() (zoomy_core.kernel.Kernel method) (zoomy_core.kernel.kernel.Kernel method) PositiveNonconservativeRusanov (class in zoomy_core.fvm.legacy.symbolic_numerics) (class in zoomy_core.fvm.riemann_solvers) PositiveQuasilinearRusanov (class in zoomy_core.fvm.legacy.symbolic_numerics) (class in zoomy_core.fvm.riemann_solvers) PositiveRusanov (class in zoomy_core.fvm.legacy.symbolic_numerics) (class in zoomy_core.fvm.riemann_solvers) post_step() (zoomy_jax.fvm.solver_jax.HyperbolicSolver method) pprint() (zoomy_core.model.models.legacy.pde_generator.ProjectedEquation method) PreProjectedEquations (class in zoomy_core.model.models.model_derivation) prescribe_fields (zoomy_core.model.aux_boundary_conditions.Lambda attribute) (zoomy_core.model.boundary_conditions.FromData attribute) (zoomy_core.model.boundary_conditions.InflowOutflow attribute) (zoomy_core.model.boundary_conditions.Lambda attribute) PRESSURE_FLUX (zoomy_core.model.models.zeta_projection.TermType attribute) pressure_gmres_maxiter (zoomy_core.fvm.solver_splitting_numpy.SplittingSolver attribute) pressure_gmres_tol (zoomy_core.fvm.solver_splitting_numpy.SplittingSolver attribute) pressure_gradient (zoomy_core.model.models.legacy.pde_generator.ProjectedEquation attribute) pressure_x (zoomy_core.model.models.vam_derivation.VAMPreProjectedEquations attribute) (zoomy_core.model.models.vam_zeta_projection.VAMZetaProjectedEquations attribute)

PRESSURE_X_BOUNDARY (zoomy_core.model.models.vam_zeta_projection.VAMTermType attribute) PRESSURE_X_GRADIENT (zoomy_core.model.models.vam_zeta_projection.VAMTermType attribute) pressure_z (zoomy_core.model.models.vam_derivation.VAMPreProjectedEquations attribute) (zoomy_core.model.models.vam_zeta_projection.VAMZetaProjectedEquations attribute) PRESSURE_Z_BOUNDARY (zoomy_core.model.models.vam_zeta_projection.VAMTermType attribute) PRESSURE_Z_VOLUME (zoomy_core.model.models.vam_zeta_projection.VAMTermType attribute) PriceC (class in zoomy_jax.fvm.nonconservative_flux) print_boundary_conditions() (zoomy_core.model.basemodel.Model method) print_equations() (zoomy_core.model.analysis.ModelAnalyser method) (zoomy_core.model.models.projected_model.ProjectedModel method) (zoomy_core.model.models.vam_model.VAMModel method) (zoomy_core.model.models.vam_projected_model.VAMProjectedPoisson method) print_model_functions() (in module zoomy_core.model.derivative_workflow) (zoomy_core.model.basemodel.Model method) printer (zoomy_core.transformation.to_numpy.NumpyRuntimeModel attribute) (zoomy_core.transformation.to_ufl.UFLRuntimeModel attribute) (zoomy_jax.transformation.to_jax.JaxRuntimeModel attribute) (zoomy_jax.transformation.to_jax.JaxRuntimeSymbolic attribute) ProductRule (class in zoomy_core.model.models.ins_generator) project() (zoomy_core.model.models.ins_generator.Expression method) (zoomy_core.model.models.symbolic_integrator.SymbolicIntegrator method) project_2d_to_3d() (zoomy_core.model.basemodel.Model method) (zoomy_core.model.models.legacy.shallow_water.ShallowWaterEquations method) (zoomy_core.model.models.legacy.shallow_water_topo.ShallowWaterEquationsWithTopo method) project_3d_to_2d() (zoomy_core.model.basemodel.Model method) project_all() (zoomy_core.model.models.legacy.pde_generator.GalerkinProjection method) project_continuity() (zoomy_core.model.models.legacy.pde_generator.GalerkinProjection method) project_momentum() (zoomy_core.model.models.legacy.pde_generator.GalerkinProjection method) project_onto_basis() (zoomy_core.model.models.basisfunctions.Basisfunction method) (zoomy_core.model.models.ins_generator.Expression method) project_to_zeta() (in module zoomy_core.model.models.zeta_projection) project_vam_to_zeta() (in module zoomy_core.model.models.vam_zeta_projection) projectable (zoomy_core.model.models.derived_model.DerivedModel attribute) (zoomy_core.model.models.sme_model.SMEInviscid attribute) (zoomy_core.model.models.sme_model.SMEModel attribute) (zoomy_core.model.models.vam_model.VAMModel attribute) ProjectedEquation (class in zoomy_core.model.models.legacy.pde_generator) ProjectedModel (class in zoomy_core.model.models.projected_model) ProjectionSolver (class in zoomy_core.fvm.legacy.projection_solver)

Q

quadrature_nodes() (zoomy_core.model.models.basisfunctions.Chebyshevu_shifted method) quasilinear_matrix() (zoomy_core.model.basemodel.Model method) (zoomy_core.model.legacy.numerical_model.NumericalModel method)

QuasilinearRusanov (class in zoomy_core.fvm.legacy.symbolic_numerics) (class in zoomy_core.fvm.riemann_solvers)

R

R (zoomy_core.model.boundary_conditions.CharacteristicReflective attribute) RadialDambreak (class in zoomy_core.model.initial_conditions) radius (zoomy_core.model.initial_conditions.RadialDambreak attribute) rank (zoomy_jax.mesh.partition.PartitionInfo attribute), [1] real_type (zoomy_core.transformation.generic_c.GenericCppBase attribute) reconstruct_alpha() (zoomy_core.model.models.basisfunctions.Basisfunction method) reconstruct_velocity_profile() (zoomy_core.model.models.basisfunctions.Basisfunction method) reconstruct_velocity_profile_at() (zoomy_core.model.models.basisfunctions.Basisfunction method) reconstruction_order (zoomy_core.fvm.solver_numpy.HyperbolicSolver attribute) recv_map (zoomy_jax.mesh.partition.PartitionInfo attribute), [1] refresh() (zoomy_core.mesh.mesh_catalog.MeshCatalog method) refresh_async() (zoomy_core.mesh.mesh_catalog.MeshCatalog method) register_map() (zoomy_core.transformation.generic_c.GenericCppBase method) register_symbolic_function() (zoomy_core.model.basefunction.SymbolicRegistrar method) register_sympy_attribute() (in module zoomy_core.model.basemodel) regularize() (zoomy_core.kernel.Kernel method) (zoomy_core.kernel.kernel.Kernel method) regularize_denominator() (in module zoomy_core.transformation.helpers) regularize_denominators() (in module zoomy_core.model.legacy.numerical_model) regularize_sqrt_arguments() (in module zoomy_core.model.legacy.numerical_model) Relation (class in zoomy_core.model.models.ins_generator) remove_equation() (zoomy_core.model.models.derived_system.System method) (zoomy_core.model.models.derived_system.SystemBoundaryConditions method) remove_exponential() (zoomy_core.model.analysis.ModelAnalyser method) requested_derivatives() (zoomy_core.model.derivative_workflow.StructuredDerivativeModel method) require() (in module zoomy_core.decorators.decorators) residual() (zoomy_core.model.basemodel.Model method) resolve_field_name() (zoomy_core.model.derivative_workflow.StructuredDerivativeModel method)

resolve_periodic_bcs() (zoomy_core.mesh.base_mesh.BaseMesh method) RestartFromHdf5 (class in zoomy_core.model.initial_conditions) right_eigenvectors() (zoomy_core.model.basemodel.Model method) RK1() (in module zoomy_core.fvm.ode) (in module zoomy_jax.fvm.ode) RK2() (in module zoomy_core.fvm.ode) (in module zoomy_jax.fvm.ode) RK3() (in module zoomy_core.fvm.ode) (in module zoomy_jax.fvm.ode) RKimplicit() (in module zoomy_core.fvm.ode) (in module zoomy_jax.fvm.ode) role (zoomy_core.model.models.model_derivation.TaggedTerm attribute) (zoomy_core.model.models.zeta_projection.ZetaTerm attribute) RoughWall (class in zoomy_core.model.boundary_conditions) RP (class in zoomy_core.model.initial_conditions) RP2d (class in zoomy_core.model.initial_conditions) RP3d (class in zoomy_core.model.initial_conditions) run_simulation() (zoomy_core.fvm.solver_imex_numpy.IMEXSolver method) (zoomy_core.fvm.solver_numpy.HyperbolicSolver method) (zoomy_core.fvm.solver_splitting_numpy.SplittingSolver method) (zoomy_jax.fvm.solver_jax.HyperbolicSolver method) runtime_only_s (zoomy_core.fvm.solver_imex_numpy.IMEXStats attribute) (zoomy_jax.fvm.solver_imex_jax.IMEXStats attribute) Rusanov (class in zoomy_core.fvm.legacy.flux) (class in zoomy_core.fvm.legacy.nonconservative_flux) (class in zoomy_core.fvm.legacy.symbolic_numerics) (class in zoomy_core.fvm.riemann_solvers) (class in zoomy_jax.fvm.flux) (class in zoomy_jax.fvm.nonconservative_flux)

S

S (zoomy_core.model.boundary_conditions.CharacteristicReflective attribute) safe_denominator() (zoomy_core.kernel.Kernel method) (zoomy_core.kernel.kernel.Kernel method) save() (zoomy_core.misc.description.Description method) (zoomy_core.model.models.derived_system.System method) save_fields_test() (in module zoomy_core.misc.io) save_session() (in module zoomy_core.misc.save_session) save_settings() (in module zoomy_core.misc.io) ScalarAdvection (class in zoomy_core.model.models.advection_model) ScalarAdvectionDiffusion (class in zoomy_core.model.models.advection_model) scale_lsq_derivative() (in module zoomy_core.mesh.lsq_reconstruction) scaled_q_indices (zoomy_core.fvm.riemann_solvers.Numerics attribute) search() (zoomy_core.mesh.mesh_catalog.MeshCatalog method) send_map (zoomy_jax.mesh.partition.PartitionInfo attribute), [1] set() (zoomy_core.model.models.derived_system.SystemBoundaryConditions method) Settings (class in zoomy_core.misc.misc) settings (zoomy_core.fvm.solver_numpy.Solver attribute) setup_simulation() (zoomy_core.fvm.solver_imex_numpy.IMEXSolver method) (zoomy_core.fvm.solver_numpy.HyperbolicSolver method) (zoomy_core.fvm.solver_splitting_numpy.SplittingSolver method) (zoomy_jax.fvm.solver_jax.HyperbolicSolver method) ShallowWaterEquations (class in zoomy_core.model.models.legacy.shallow_water) ShallowWaterEquationsWithTopo (class in zoomy_core.model.models.legacy.shallow_water_topo) ShearShallowFlow (class in zoomy_core.model.models.legacy.shear_shallow_flow) ShearShallowFlow2d (class in zoomy_core.model.models.legacy.shear_shallow_flow) ShearShallowFlowEnergy (class in zoomy_core.model.models.legacy.shear_shallow_flow) ShearShallowFlowPathconservative (class in zoomy_core.model.models.legacy.shear_shallow_flow) ShearShallowFlowPathconservative2 (class in zoomy_core.model.models.legacy.shear_shallow_flow) short_name (zoomy_core.mesh.mesh_catalog.MeshEntry property) show() (zoomy_core.mesh.mesh_catalog.MeshCatalog method) show_meshes() (in module zoomy_core.mesh.browse_meshes) show_meshes_async() (in module zoomy_core.mesh.browse_meshes) simplify() (zoomy_core.model.models.ins_generator.Expression method) SimplifyIntegrals (class in zoomy_core.model.models.ins_generator) sizes (zoomy_core.mesh.mesh_catalog.MeshEntry attribute) slip() (zoomy_core.model.models.projected_model.ProjectedModel method) SLIP_SOURCE (zoomy_core.model.models.zeta_projection.TermType attribute) sme() (in module zoomy_core.model.models.derived_system) SMEInviscid (class in zoomy_core.model.models.sme_model) SMEModel (class in zoomy_core.model.models.sme_model) snapshot (zoomy_core.model.initial_conditions.RestartFromHdf5 attribute) solve() (zoomy_core.fvm.legacy.projection_solver.ProjectionSolver method) (zoomy_core.fvm.solver_imex_numpy.IMEXSolver method) (zoomy_core.fvm.solver_numpy.HyperbolicSolver method) (zoomy_core.fvm.solver_splitting_numpy.SplittingSolver method) (zoomy_jax.fvm.solver_imex_jax.IMEXSourceSolverJax method) (zoomy_jax.fvm.solver_jax.HyperbolicSolver method) (zoomy_jax.fvm.solver_jax.PoissonSolver method) solve_for_constraints() (zoomy_core.model.analysis.ModelAnalyser method) solve_for_dispersion_relation() (zoomy_core.model.analysis.ModelAnalyser method) solve_phase_velocity_from_linearized() (zoomy_core.model.analysis_linear.LinearWaveAnalyser method) Solver (class in zoomy_core.fvm.solver_numpy) source() (zoomy_core.model.basemodel.Model method) (zoomy_core.model.legacy.numerical_model.NumericalModel method) (zoomy_core.model.models.derived_model.DerivedModel method) (zoomy_core.model.models.legacy.shallow_water.ShallowWaterEquations method) (zoomy_core.model.models.legacy.shallow_water_topo.ShallowWaterEquationsWithTopo method) (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlow method) (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlow2d method) (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlowPathconservative method) (zoomy_core.model.models.projected_model.ProjectedModel method) (zoomy_core.model.models.sme_model.SMEModel method) (zoomy_core.model.models.vam_model.VAMModel method) (zoomy_core.model.models.vam_model.VAMNewtonian method)

source_implicit() (zoomy_core.model.models.legacy.GN.GN method) (zoomy_core.model.models.legacy.vam.VAMFullImplicit method) (zoomy_core.model.models.legacy.vam.VAMHyperbolic method) (zoomy_core.model.models.legacy.vam.VAMPoisson method) (zoomy_core.model.models.legacy.vam.VAMPoissonFull method) (zoomy_core.model.models.vam_model.VAMModel method) (zoomy_core.model.models.vam_projected_model.VAMProjectedHyperbolic method) source_jacobian_wrt_aux_variables() (zoomy_core.model.basemodel.Model method) source_jacobian_wrt_variables() (zoomy_core.model.basemodel.Model method) source_mode (zoomy_core.fvm.solver_imex_numpy.IMEXSolver attribute) (zoomy_core.fvm.solver_imex_numpy.IMEXStats attribute) (zoomy_jax.fvm.solver_imex_jax.IMEXSourceSolverJax attribute) (zoomy_jax.fvm.solver_imex_jax.IMEXStats attribute) Spline (class in zoomy_core.model.models.basisfunctions) SplineBasis (class in zoomy_core.model.models.basisfunctions) SplittingSolver (class in zoomy_core.fvm.solver_splitting_numpy) state (zoomy_core.model.models.derived_model.DerivedModel property) (zoomy_core.model.models.derived_system.System attribute) (zoomy_core.model.models.model_derivation.PreProjectedEquations attribute) (zoomy_core.model.models.vam_derivation.VAMPreProjectedEquations attribute) (zoomy_core.model.models.vam_zeta_projection.VAMZetaProjectedEquations attribute) (zoomy_core.model.models.zeta_projection.ZetaProjectedEquations attribute) StateSpace (class in zoomy_core.model.models.ins_generator) step() (zoomy_core.fvm.solver_imex_numpy.IMEXSolver method) (zoomy_core.fvm.solver_numpy.HyperbolicSolver method) (zoomy_core.fvm.solver_splitting_numpy.SplittingSolver method) (zoomy_jax.fvm.solver_jax.HyperbolicSolver method) strategy (zoomy_core.model.models.symbolic_integrator.SymbolicIntegrator property) stress_free_surface (zoomy_core.model.models.ins_generator.assumptions attribute) StressFreeSurface (class in zoomy_core.model.models.ins_generator) StructuredDerivativeModel (class in zoomy_core.model.derivative_workflow) subs() (zoomy_core.misc.misc.ZArray method) (zoomy_core.model.models.ins_generator.Expression method) substitute_into_integrand() (zoomy_core.model.models.legacy.pde_generator.LayeredAnsatz method) substitute_sympy_attributes_with_symbol_matrix() (in module zoomy_core.transformation.helpers) SubVolumeMesh (class in zoomy_core.mesh.subvolume_mesh) summarize_model() (zoomy_core.model.basemodel.Model method) summary() (zoomy_core.model.models.model_derivation.PreProjectedEquations method) (zoomy_core.model.models.vam_derivation.VAMPreProjectedEquations method) (zoomy_core.model.models.vam_zeta_projection.VAMZetaProjectedEquations method) (zoomy_core.model.models.zeta_projection.ZetaProjectedEquations method) SymbolicBase (class in zoomy_core.model.models.ins_generator) SymbolicIntegrator (class in zoomy_core.model.models.symbolic_integrator) SymbolicRegistrar (class in zoomy_core.model.basefunction) System (class in zoomy_core.model.models.derived_system) system (zoomy_core.model.models.derived_model.DerivedModel property) SystemBoundaryConditions (class in zoomy_core.model.models.derived_system) SystemExtrapolation (class in zoomy_core.model.boundary_conditions) SystemPeriodic (class in zoomy_core.model.boundary_conditions) SystemWall (class in zoomy_core.model.boundary_conditions)

T

tag (zoomy_core.model.boundary_conditions.BoundaryCondition attribute) TaggedTerm (class in zoomy_core.model.models.model_derivation) tags (zoomy_core.model.models.derived_system.SystemBoundaryConditions property) temporal (zoomy_core.model.models.ins_generator.Expression property) term_type (zoomy_core.model.models.zeta_projection.ZetaTerm attribute) terms (zoomy_core.model.models.ins_generator.Expression property) TermType (class in zoomy_core.model.models.zeta_projection) time_end (zoomy_core.fvm.legacy.projection_solver.ProjectionSolver attribute) (zoomy_core.fvm.solver_numpy.HyperbolicSolver attribute) timeline (zoomy_core.model.boundary_conditions.FromData attribute) to_latex() (zoomy_core.misc.description.Description method) to_markdown() (zoomy_core.misc.description.Description method) to_new_mesh() (in module zoomy_core.misc.interpolation)

to_runtime() (zoomy_core.fvm.riemann_solvers.Numerics method) to_runtime_numpy() (zoomy_core.fvm.riemann_solvers.Numerics method) tomatrix() (zoomy_core.misc.misc.ZArray method) topography() (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlow method) (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlow2d method) (zoomy_core.model.models.legacy.shear_shallow_flow.ShearShallowFlowPathconservative method) TOPOGRAPHY_NC (zoomy_core.model.models.zeta_projection.TermType attribute) topography_term() (zoomy_core.model.models.legacy.shallow_water.ShallowWaterEquations method) total_time_s (zoomy_core.fvm.solver_imex_numpy.IMEXStats attribute) (zoomy_jax.fvm.solver_imex_jax.IMEXStats attribute) triple_product() (zoomy_core.model.models.symbolic_integrator.SymbolicIntegrator method) type (zoomy_core.mesh.base_mesh.BaseMesh attribute) (zoomy_jax.mesh.mesh.MeshJAX attribute) types (zoomy_core.mesh.mesh_catalog.MeshEntry attribute)

U

U_ADVECTIVE_FLUX (zoomy_core.model.models.vam_zeta_projection.VAMTermType attribute) U_INERTIA (zoomy_core.model.models.vam_zeta_projection.VAMTermType attribute) U_MEAN_VEL_NC (zoomy_core.model.models.vam_zeta_projection.VAMTermType attribute) U_TOPOGRAPHY_NC (zoomy_core.model.models.vam_zeta_projection.VAMTermType attribute) U_VERTICAL_ADV_NC (zoomy_core.model.models.vam_zeta_projection.VAMTermType attribute) UFLRuntimeModel (class in zoomy_core.transformation.to_ufl) update() (zoomy_core.misc.misc.Zstruct method) update_aux_variables() (zoomy_core.model.basemodel.Model method) update_aux_variables_jacobian_wrt_variables() (zoomy_core.model.basemodel.Model method) update_q() (zoomy_core.fvm.solver_numpy.Solver method) (zoomy_jax.fvm.solver_jax.HyperbolicSolver method)

update_qaux() (zoomy_core.fvm.solver_numpy.Solver method) (zoomy_core.model.derivative_workflow.DerivativeAwareSolverMixin method) update_variables() (zoomy_core.model.basemodel.Model method) (zoomy_core.model.legacy.numerical_model.NumericalModel method) update_variables_jacobian_wrt_variables() (zoomy_core.model.basemodel.Model method) url() (zoomy_core.mesh.mesh_catalog.MeshEntry method) use_cse (zoomy_core.transformation.to_ufl.UFLRuntimeModel attribute) use_gradient (zoomy_core.model.boundary_conditions.Extrapolation attribute) (zoomy_core.model.boundary_conditions.Wall attribute) user_aux_variables (zoomy_core.model.derivative_workflow.StructuredDerivativeModel attribute) UserFunction (class in zoomy_core.model.initial_conditions)

V

values() (zoomy_core.misc.misc.Zstruct method) vam() (in module zoomy_core.model.models.derived_system) VAMFullImplicit (class in zoomy_core.model.models.legacy.vam) VAMHyperbolic (class in zoomy_core.model.models.legacy.vam) VAMModel (class in zoomy_core.model.models.vam_model) VAMNewtonian (class in zoomy_core.model.models.vam_model) VAMPoisson (class in zoomy_core.model.models.legacy.vam) VAMPoissonFull (class in zoomy_core.model.models.legacy.vam) VAMPreProjectedEquations (class in zoomy_core.model.models.vam_derivation) VAMProjectedHyperbolic (class in zoomy_core.model.models.vam_projected_model) VAMProjectedPoisson (class in zoomy_core.model.models.vam_projected_model) VAMTermType (class in zoomy_core.model.models.vam_zeta_projection) VAMZetaProjectedEquations (class in zoomy_core.model.models.vam_zeta_projection)

var() (zoomy_core.kernel.Kernel method) (zoomy_core.kernel.kernel.Kernel method) variables (zoomy_core.model.basemodel.Model attribute) variables() (zoomy_core.model.models.legacy.shallow_water.ShallowWaterEquations method) (zoomy_core.model.models.legacy.shallow_water_topo.ShallowWaterEquationsWithTopo method) vertex_coordinates (zoomy_core.mesh.base_mesh.BaseMesh attribute) (zoomy_jax.mesh.mesh.MeshJAX attribute) VERTICAL_ADVECTION_NC (zoomy_core.model.models.zeta_projection.TermType attribute) viscosity (zoomy_core.fvm.solver_splitting_numpy.SplittingSolver attribute) VISCOUS_SOURCE (zoomy_core.model.models.zeta_projection.TermType attribute) volume (zoomy_core.model.models.ins_generator.DepthIntegralResult attribute) (zoomy_core.model.models.legacy.pde_generator.ProjectedEquation attribute) volume() (in module zoomy_core.mesh.mesh_util) vtk_project_2d_to_3d() (in module zoomy_core.postprocessing.postprocessing)

W

W_CLOSURE (zoomy_core.model.models.vam_zeta_projection.VAMTermType attribute) W_CROSS_FLUX (zoomy_core.model.models.vam_zeta_projection.VAMTermType attribute) W_GRAVITY (zoomy_core.model.models.vam_zeta_projection.VAMTermType attribute) W_INERTIA (zoomy_core.model.models.vam_zeta_projection.VAMTermType attribute) W_VERTICAL_ADV (zoomy_core.model.models.vam_zeta_projection.VAMTermType attribute) Wall (class in zoomy_core.model.boundary_conditions) wall_slip (zoomy_core.model.boundary_conditions.Wall attribute) WallMomentumBC (class in zoomy_core.model.boundary_conditions) weight() (zoomy_core.model.models.basisfunctions.Basisfunction method) (zoomy_core.model.models.basisfunctions.Chebyshevu method) (zoomy_core.model.models.basisfunctions.Chebyshevu_shifted method) (zoomy_core.model.models.basisfunctions.GalerkinBasis method) (zoomy_core.model.models.basisfunctions.SplineBasis method)

weight_eval() (zoomy_core.model.models.basisfunctions.Basisfunction method) wet_dry_threshold (zoomy_core.model.legacy.numerical_model.NumericalModel property) window_function() (zoomy_core.model.models.legacy.pde_generator.LayeredAnsatz method) with_assumption() (zoomy_core.model.models.derived_system.System method) with_basis() (zoomy_core.model.models.derived_system.System method) with_material() (zoomy_core.model.models.derived_system.System method) wrap_function_signature() (zoomy_core.transformation.generic_c.GenericCppBase method) (zoomy_core.transformation.to_amrex.AmrexCore method) (zoomy_core.transformation.to_openfoam.FoamModel method) write_code() (zoomy_core.transformation.generic_c.GenericCppModel class method) (zoomy_core.transformation.generic_c.GenericCppNumerics class method) write_dict_to_hdf5() (in module zoomy_core.misc.io) write_json() (zoomy_core.misc.misc.Settings method) write_to_hdf5() (zoomy_core.mesh.base_mesh.BaseMesh method)

X

x_momentum (zoomy_core.model.models.model_derivation.PreProjectedEquations attribute) (zoomy_core.model.models.vam_derivation.VAMPreProjectedEquations attribute) (zoomy_core.model.models.vam_zeta_projection.VAMZetaProjectedEquations attribute) (zoomy_core.model.models.zeta_projection.ZetaProjectedEquations attribute)

x_momentum() (zoomy_core.model.models.legacy.pde_generator.INSBase method)

Y

y_momentum (zoomy_core.model.models.model_derivation.PreProjectedEquations attribute) (zoomy_core.model.models.zeta_projection.ZetaProjectedEquations attribute)

y_momentum() (zoomy_core.model.models.legacy.pde_generator.INSBase method)

Z

z_momentum (zoomy_core.model.models.vam_derivation.VAMPreProjectedEquations attribute) (zoomy_core.model.models.vam_zeta_projection.VAMZetaProjectedEquations attribute) z_of_zeta() (zoomy_core.model.models.legacy.pde_generator.GalerkinProjection method) z_ordering (zoomy_core.mesh.base_mesh.BaseMesh attribute) (zoomy_jax.mesh.mesh.MeshJAX attribute) ZArray (class in zoomy_core.misc.misc) Zero (class in zoomy_core.fvm.legacy.flux) (class in zoomy_core.fvm.legacy.nonconservative_flux) (class in zoomy_jax.fvm.flux) (class in zoomy_jax.fvm.nonconservative_flux) zero_atmospheric_pressure (zoomy_core.model.models.ins_generator.assumptions attribute) ZeroAtmosphericPressure (class in zoomy_core.model.models.ins_generator) ZetaProjectedEquations (class in zoomy_core.model.models.zeta_projection) ZetaTerm (class in zoomy_core.model.models.zeta_projection) ZetaTransform (class in zoomy_core.model.models.ins_generator) zoomy_core module zoomy_core.decorators module zoomy_core.decorators.decorators module zoomy_core.fvm module zoomy_core.fvm.jvp_numpy module zoomy_core.fvm.legacy module zoomy_core.fvm.legacy.flux module zoomy_core.fvm.legacy.nonconservative_flux module zoomy_core.fvm.legacy.projection_solver module zoomy_core.fvm.legacy.symbolic_numerics module zoomy_core.fvm.ode module zoomy_core.fvm.reconstruction module zoomy_core.fvm.riemann_solvers module zoomy_core.fvm.solver_imex_numpy module zoomy_core.fvm.solver_numpy module zoomy_core.fvm.solver_splitting_numpy module zoomy_core.fvm.timestepping module zoomy_core.kernel module zoomy_core.kernel.kernel module zoomy_core.mesh module zoomy_core.mesh.base_mesh module zoomy_core.mesh.browse_meshes module zoomy_core.mesh.derivatives module zoomy_core.mesh.fvm_mesh module zoomy_core.mesh.lsq_mesh module zoomy_core.mesh.lsq_reconstruction module zoomy_core.mesh.mesh_catalog module zoomy_core.mesh.mesh_extrude module zoomy_core.mesh.mesh_util module zoomy_core.mesh.subvolume_mesh module zoomy_core.misc module zoomy_core.misc.custom_types module zoomy_core.misc.description module zoomy_core.misc.interpolation module zoomy_core.misc.io module zoomy_core.misc.logger_config module zoomy_core.misc.misc module zoomy_core.misc.save_session module zoomy_core.model module zoomy_core.model.analysis module zoomy_core.model.analysis_linear module zoomy_core.model.aux_boundary_conditions module zoomy_core.model.basefunction module zoomy_core.model.basemodel module zoomy_core.model.boundary_conditions module zoomy_core.model.derivative_workflow module zoomy_core.model.initial_conditions module zoomy_core.model.kernel_functions module

zoomy_core.model.legacy module zoomy_core.model.legacy.numerical_model module zoomy_core.model.models module zoomy_core.model.models.advection_model module zoomy_core.model.models.basisfunctions module zoomy_core.model.models.derived_model module zoomy_core.model.models.derived_system module zoomy_core.model.models.ins3d_model module zoomy_core.model.models.ins_generator module zoomy_core.model.models.legacy module zoomy_core.model.models.legacy.basis_cache module zoomy_core.model.models.legacy.GN module zoomy_core.model.models.legacy.pde_generator module zoomy_core.model.models.legacy.shallow_water module zoomy_core.model.models.legacy.shallow_water_topo module zoomy_core.model.models.legacy.shear_shallow_flow module zoomy_core.model.models.legacy.vam module zoomy_core.model.models.model_derivation module zoomy_core.model.models.projected_model module zoomy_core.model.models.sme_model module zoomy_core.model.models.symbolic_integrator module zoomy_core.model.models.vam_derivation module zoomy_core.model.models.vam_model module zoomy_core.model.models.vam_projected_model module zoomy_core.model.models.vam_zeta_projection module zoomy_core.model.models.zeta_projection module zoomy_core.postprocessing module zoomy_core.postprocessing.postprocessing module zoomy_core.preprocessing module zoomy_core.transformation module zoomy_core.transformation.generic_c module zoomy_core.transformation.helpers module zoomy_core.transformation.to_amrex module zoomy_core.transformation.to_c module zoomy_core.transformation.to_numpy module zoomy_core.transformation.to_openfoam module zoomy_core.transformation.to_ufl module zoomy_jax module zoomy_jax.fvm module zoomy_jax.fvm.flux module zoomy_jax.fvm.halo_exchange module zoomy_jax.fvm.jvp_jax module zoomy_jax.fvm.nonconservative_flux module zoomy_jax.fvm.ode module zoomy_jax.fvm.reconstruction_jax module zoomy_jax.fvm.solver_imex_jax module zoomy_jax.fvm.solver_jax module zoomy_jax.mesh module zoomy_jax.mesh.mesh module zoomy_jax.mesh.partition module zoomy_jax.misc module zoomy_jax.misc.io module zoomy_jax.transformation module zoomy_jax.transformation.to_jax module Zstruct (class in zoomy_core.misc.misc)